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Name : HMPREF0424_0629 (HMPREF0424_0629) Accession : YP_003373863.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Resistance Product : copper-exporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.4 Position : 700583 - 702679 bp Length : 2097 bp Strand : + Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 DNA sequence : ATGAACAATAACAACAAACATTCATCCCACAGTCACCATAATCATGGCGACATGGATCATTCAAAACATGAGCACGTAAG CACAGACGAACATGGAGACCATAATAATCAACATCAAGAACATCATGCTGGGCATGATCACAGCGGACACAGTGGGCATG ACCACCATCATCACGGAAACTTTAAGGAACTTTTCTTAAAATCATTGCCACTAGGAATCATTATTATGCTCTTATCCCCT ATGGCTGGGTTTGACCTACCATTCCAGTTTACTTTTCCATATTCTGATATTGTAGTAGCTATTTTATCTACTATATTAAT TATTTATGGTGGACGTCCATTCTATCAAGGGGCAGTTGACGAATTTAAACAAAAAGAACCTGGAATGATGGCTCTCGTAT CTTTAGGTTTAAGTGTTTCATATTTATATAGTATTTATACTGTAATAGCAAGCTACGTAACAGGTGAACAAATTATGGAT TTTTTCTTTGAATTTGCTTCATTACTATTAATCATGTTATTAGGTCACTGGATTGAGATGAAAGCTATTGGAGAAGCAGG AGACGCACAAGCAGAATTGGCTAAGTTAGTGCCGAAAGATGCTCACGTTGTATTAGAAGACGATTCAATTGAAACACGAC CAGTTGCTGACTTAAAGGTAGGTGATTTAATTCGAGTTCAAGCTGGAGAAAATGTGCCAGCAGATGGAACTATCGAGCGT GGAGAATCACGTCTAAATGAAGCTCTTTTGACTGGGGAATCAAAAGCAGTTAAAAAAGGTCCTGGCGATGAAGTAATCGG AGGCTCAACAAATGGGGAAGGGGTTCTTTATATTAAAGTGAATGAGACAGGTGATCAATCCTTCATCTCTCAAGTACAGA CTTTAATCAGCCAAGCTCAAAGTCAGCCTTCCAGAGCAGAAAATATTGCTCAAAAGGTTGCAGGGTGGCTCTTCTATATT GCGGTCATTGTCGCACTAATAGCTTTTGTAGTATGGACGCTTATAGCGGACATCCCAACGGCAGTAAAATTTGCTATCAC AACATTAGTTATAGCTTGTCCTCACGCTTTGGGTCTAGCTATTCCATTGGTAACCGCTCGTAGCACAAGCTTAGGGGCAA GTCGTGGCTTACTAGTAAAAGACCGAGAATCTTTAGAAATAGCTCAAGATGCAGATGTGATGATTTTAGATAAGACAGGT ACTTTAACAACAGGTGAGTTTAAAGTATTAGATGTTGAACTTTTTAATGAAAAATATACAAAAGAAGAAATCATTTCACT ATTGGCAGGTATTGAAGGAGGGTCTAGTCACCCTATTGCTCAATCAATTATAAGTTTCGCCGAGCAGCAAGATATACGTC CAGTATCTTTTGATTCGATTGATGTAATTTCCGGTGCTGGCGTAGAAGGTAAAGCCAATGGGCACCAATACCAATTAATC AGTCAAAAAGAATACGGGCGTAATCTAGATATTGATATTCCAAAAGGAGCAACCCTCAGTGTCTTAGTAGAAAACGATGA TGCCATTGGTGCTGTAGCTTTGGGGGATGAATTAAAAGCAACCAGTAAAGAGTTAATTAAAGCTCTTAAAAATAACAATA TAGAGCCAATTATGGCAACAGGTGATAATGAAAAAGCGGCTCAAGGCGCGGCAGAAGATTTAGAGATTGAATATAGATCA AATCAATCTCCACAAGACAAATATGAGTTAGTAAAAACACTTAAAGAAGAAGGAAAAAAAGTTATCATGGTAGGTGACGG TGTCAATGATGCTCCTTCTCTTGCCTTAGCAGATGTTGGTATAGCTGTAGGTGCTGGAACCCAAGTGGCATTGGATTCAG CTGATGTCATCTTGACTCAATCTGATCCAGGAGATATTGAATCATTCATTGAATTAGCACACAAAACAACTCGTAAAATG AAACAAAACCTCTTTTGGGGAGCTGGTTATAACTTTATAGCTATCCCTCTAGCTGCAGGAATTTTGGCCCCTTTTGGTTT CACATTAAGTCCTGCAGTAGGAGCAATTCTAATGTCTGTGTCAACAGTCATCGTCGCCATTAATGCTATTTTATTAAAAT TAGATCCGAAAAAATGA Protein sequence : MNNNNKHSSHSHHNHGDMDHSKHEHVSTDEHGDHNNQHQEHHAGHDHSGHSGHDHHHHGNFKELFLKSLPLGIIIMLLSP MAGFDLPFQFTFPYSDIVVAILSTILIIYGGRPFYQGAVDEFKQKEPGMMALVSLGLSVSYLYSIYTVIASYVTGEQIMD FFFEFASLLLIMLLGHWIEMKAIGEAGDAQAELAKLVPKDAHVVLEDDSIETRPVADLKVGDLIRVQAGENVPADGTIER GESRLNEALLTGESKAVKKGPGDEVIGGSTNGEGVLYIKVNETGDQSFISQVQTLISQAQSQPSRAENIAQKVAGWLFYI AVIVALIAFVVWTLIADIPTAVKFAITTLVIACPHALGLAIPLVTARSTSLGASRGLLVKDRESLEIAQDADVMILDKTG TLTTGEFKVLDVELFNEKYTKEEIISLLAGIEGGSSHPIAQSIISFAEQQDIRPVSFDSIDVISGAGVEGKANGHQYQLI SQKEYGRNLDIDIPKGATLSVLVENDDAIGAVALGDELKATSKELIKALKNNNIEPIMATGDNEKAAQGAAEDLEIEYRS NQSPQDKYELVKTLKEEGKKVIMVGDGVNDAPSLALADVGIAVGAGTQVALDSADVILTQSDPGDIESFIELAHKTTRKM KQNLFWGAGYNFIAIPLAAGILAPFGFTLSPAVGAILMSVSTVIVAINAILLKLDPKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-99 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0424_0629 | YP_003373863.1 | copper-exporting ATPase | BAC0383 | Protein | 0.0 | 77 |
| HMPREF0424_0629 | YP_003373863.1 | copper-exporting ATPase | BAC0079 | Protein | 8e-131 | 50 |
| HMPREF0424_0629 | YP_003373863.1 | copper-exporting ATPase | BAC0629 | Protein | 2e-98 | 45 |
