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Name : pyk (HMPREF0424_0607) Accession : YP_003373843.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Virulence Product : pyruvate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0469 EC number : 2.7.1.40 Position : 665414 - 666853 bp Length : 1440 bp Strand : + Note : identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 DNA sequence : ATGCGTAAAGCCAAAATCGTTGATACTATTGGTCCAGCTACCGAATCCTTGGAAGGTATTACCAAGCTTGTTGAAGCCGG TATGGATGTTGCTCGTTTGAACCGTTCTCACGGCACTCCTGAAGATCATTTGCGCGTTTACAACAACGTTCGTGCAGCTT CCAAGTCCACTGGCCGCAATGTTGCTGCTCTTGTTGATTTGCAAGGTCCAAAGATTCGCTGCGGTTGGTTCAAGAAGAAC GCTGAAGGCGAAGATAAGGTTTATTTGGAAGAAGGTCAGGAGTTCATCATCACTACTGATGATGTTGAAGGTGACGAGCA CCGCACTTCTACAACTTTTAAGGGCTTGCCAGGAGATTGCCACGCAGGCGACCCAATCCTTATCGATGACGGTAAGGTTC GTCTTGAGGTAACCAAGGTAGAAGGCAACGACGTTCACACTAAGGTTATTGTTGCTGGTCCAGTTTCCAGCCACAAGGGC ATTAACCTCCCAGGTGTTGCAGTTTCTCTTCCAGCTTTGACTGAAAAGGATGAGGCTGATCTTCGTTGGGCTATTCGCAC CGGCGCTGACATTATTGCTATGTCCTTCGTGCGTTTCGCTACCGATATTGATCGCGCTCACGAAATCATGGACGAAGAAG GTCGTCGTATTCCAATCGTCGCCAAGATTGAAAAGCCACAGGCTGTTGAAAACTTGGAAGAGATTGTTAAGACCTTCGAT GGCATTATGGTTGCTCGTGGTGATATGGCTGTTGAAATGCCTCTCGAAGAGGTTCCACTGGTCACCAAGCGTTGCATCGA GCTTTCTCGTCGCTATGCAAAGCCAGTTATCGTTGCTACTGAAGTTCTTGGCACAATGGTTAACTCTCCAGTTCCAACTC GTGCAGAAGCTTCTGACTGCGCTAACGCTGTTCTCGACGGTGCTGACGCAACAATGACTTCTAACGAAACTGCTGTTGGT AAGTACCCAGATGTTACCGTAAAGACCATGTCCCGTATTTCTCAGTACGCAACTGAGCACGGCTATGATCGCATTCCTGC TGTTGAGCTTGATATGTCTAGCACCGGTGCTGTTTCTTCTGCAGCTGTTGATTTGGCAGATAAGCTTAATGCTAAGGCTA TTGTTGCTTACACTCAGACTGGTCGCACAGTTCATCGTATTTCTCGTGAACGTCCAACCGCTCCAATCTTTGGCTTGACT AACAATGAGCACACTTATCGTTGGTTGGCTTTGAGCTGGGGCACTGAAGGCTTCTTGATTGATGAAGATTACCATGACAT GAATCGTCACGATTTGATGATCTTCACCGACAAGGTTCTTCGCGAAGCCGGTAAGGTTTCCGATGGTGATCAGATTGTTA TCTTGAGCACTGCTCAGGGTGAACGCCAGGCTGGTCGTACTGACTCCATCTACGTTCACACCGTTGGTGCTTGCGACTAA Protein sequence : MRKAKIVDTIGPATESLEGITKLVEAGMDVARLNRSHGTPEDHLRVYNNVRAASKSTGRNVAALVDLQGPKIRCGWFKKN AEGEDKVYLEEGQEFIITTDDVEGDEHRTSTTFKGLPGDCHAGDPILIDDGKVRLEVTKVEGNDVHTKVIVAGPVSSHKG INLPGVAVSLPALTEKDEADLRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPIVAKIEKPQAVENLEEIVKTFD GIMVARGDMAVEMPLEEVPLVTKRCIELSRRYAKPVIVATEVLGTMVNSPVPTRAEASDCANAVLDGADATMTSNETAVG KYPDVTVKTMSRISQYATEHGYDRIPAVELDMSSTGAVSSAAVDLADKLNAKAIVAYTQTGRTVHRISRERPTAPIFGLT NNEHTYRWLALSWGTEGFLIDEDYHDMNRHDLMIFTDKVLREAGKVSDGDQIVILSTAQGERQAGRTDSIYVHTVGACD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY1744 | NP_456147.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-64 | 43 |
| pykF | YP_216386.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-64 | 43 |
| pykF | NP_805051.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-64 | 43 |
| pykF | CAA68205.1 | pyruvate kinase like protein | Not tested | SPI-2 | Protein | 3e-64 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pyk | YP_003373843.1 | pyruvate kinase | VFG0479 | Protein | 4e-65 | 43 |
