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Name : HMPREF0424_0558 (HMPREF0424_0558) Accession : YP_003373795.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter family protein Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 602024 - 603364 bp Length : 1341 bp Strand : - Note : identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808 DNA sequence : ATGCTAAGTTTGCAAATTTTAAATATTATATTTAATCCGGTTATTGTGTCGGTTGTAGTGCTATGCGCACTTAGTCTTGC AAAACTTAATGTTTTGCTATCAATGATAGTAGCTTGCATTGCAGGTGGCATTGCCGGTCATCTTCCTCTTTTTGGTGACG GAAATCACACAATTATGGCTTTGCTTTGCGACGGTTTCTCCACCAACTCACAAACTGCGCTCGCCTACATTTTGCTTGGA ACTTTTGCGGAAGCAATTACTGCAACAGGCTTAGCTCAAATTATTTCTAAAAAAATTAGCAAAATTATTGGCATGAAAAA GTACGCTCTACTTGCAGTACTAACTCTAATTGCGTGCATGTCTCAAAATATTGTGCCGGTTCATATTGCTTATATTCCTA TTCTTATTCCGCCTATTTTGAGAGTTATGAATAAGATGAAGCTTGACCGCCGAGCTGCAGCATGCTGCACTGCTTTCGGT CTTGAAGTTCCGTATATTGCTATTCCATTTGGCTTTGGTCTTATTTTCCAAACTGTTATTGCTACGAATCTTTCTAAAAA TGGCATGAAGGTTAGTGTTGCAGACGTTAGTGCTGTGAACTGGTATTTAGGTCTTGCAATGTTTGCATCACTACTTTTTG CTGTATTTGTGCTTTACAGAAAACCTCGCGAATACAAAACTACAGAAACTGACACTCGCGCAGCCGACGCCGTTGTCGGA CCTCTTAAGAAACGCCACTACGTAACCATTCTCGCAATTATTGTTGTTGTAGTAGTGCAAATTATTAGTAAAGATCTTTC ACTTTCTTCTCTTGCAGGTCTTGCAACCATGATTATTTTTGGAGCAATAAAGTGGAACGACATCGACAAGCAGCTTACTG GCGGCGTAAAACTCATGGGTCTTATTGCATTTGTGATGCTCATTGCGGGCGGATATGCTAACGTGATCCAAGCGACAGGA GGAGTTGAGGAGCTTGTAAACTTTGGCGTAGCTTCTATGGGACAGAACAAACTTGTTGCCGCATTTGTTATTACGCTTAT TGGTTTGCTTGTGACTATGGGCATTGGCACTTCGTTTGGCACGGTTCCTATTCTTGCGGTTTTGTTCGTACCTCTTTGCC AGAGCATTGGTTTTAGCACTCCTGCAACGATTCTTCTTATGTCTTCCGCTGCAGCTCTTGGAGACGCAGGCTCCCCTGCT TCCGACACCACGCTCGGGCCTACTGCCGGCTTAAATGCGGACGGACAGCACAGTCACATTTGGGATACTTGCGTTCCAAC ATTCCTTATTTTCAACATTCCGCTTATGGTTGCAGGCATTGTAATATCGCAGTTTATTTAG Protein sequence : MLSLQILNIIFNPVIVSVVVLCALSLAKLNVLLSMIVACIAGGIAGHLPLFGDGNHTIMALLCDGFSTNSQTALAYILLG TFAEAITATGLAQIISKKISKIIGMKKYALLAVLTLIACMSQNIVPVHIAYIPILIPPILRVMNKMKLDRRAAACCTAFG LEVPYIAIPFGFGLIFQTVIATNLSKNGMKVSVADVSAVNWYLGLAMFASLLFAVFVLYRKPREYKTTETDTRAADAVVG PLKKRHYVTILAIIVVVVVQIISKDLSLSSLAGLATMIIFGAIKWNDIDKQLTGGVKLMGLIAFVMLIAGGYANVIQATG GVEELVNFGVASMGQNKLVAAFVITLIGLLVTMGIGTSFGTVPILAVLFVPLCQSIGFSTPATILLMSSAAALGDAGSPA SDTTLGPTAGLNADGQHSHIWDTCVPTFLIFNIPLMVAGIVISQFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 3e-55 | 42 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 3e-55 | 42 |
