Gene Information

Name : HMPREF0424_0495 (HMPREF0424_0495)
Accession : YP_003373736.1
Strain : Gardnerella vaginalis 409-05
Genome accession: NC_013721
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 541658 - 542302 bp
Length : 645 bp
Strand : +
Note : -

DNA sequence :
ATGAATTGTAGAGGACATGAAACAAGACAAAGAATTGTTAGAGATTATGAAGTTCAGCCTGAAGCACATATTAAGCTGTT
AGCAAATCAACAAAAACATAGTGATGCAGGAGCAACTATTGAAGATGAATATTATGTATTTAGTGCTAAGCGAAAAACTG
ATGGCAAGAAGGAAGTTATTCAGTGTGGCGTGGATGCGGCAAAAGATTTTTTAGAACTAATTAATCACAAAGGGTTACCT
CTTTTTAATCCTCTTGTAGGTGATCCTCATGTAAATAATAGACAAGAATATGACAATAGTGGGAGTGGGAATTTACAACC
AAAAAAGTGGAATGAAACCGCAAAGCAGCTTTATAATGCGATAATGTGGTTGATTATTTTATGGGATGCTAAACCGAATA
CACCTTTATTTGATTTTAAAGACGAAGTAATTGAGTATAAAACATATGAGCCTTTTGATAGCAAGATAAAAAGAGTAAAT
ACCACTATAAAGAATGGTAGTAAAGGGAAAACTCTAACTGAGATGATTAATGTCTACAGAGCGGATAATGATATTAGAGA
TGAAATTTGCAACTTTGATATTCTGAAAAATAAAATCCGTGATATGAAAGACCAACAAGGTAATACAATAGAATCTTATT
TTTAG

Protein sequence :
MNCRGHETRQRIVRDYEVQPEAHIKLLANQQKHSDAGATIEDEYYVFSAKRKTDGKKEVIQCGVDAAKDFLELINHKGLP
LFNPLVGDPHVNNRQEYDNSGSGNLQPKKWNETAKQLYNAIMWLIILWDAKPNTPLFDFKDEVIEYKTYEPFDSKIKRVN
TTIKNGSKGKTLTEMINVYRADNDIRDEICNFDILKNKIRDMKDQQGNTIESYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0098 NP_763653.1 hypothetical protein Not tested SCCpbp4 Protein 1e-20 41
SAS0044 YP_042174.1 hypothetical protein Not tested SCC476 Protein 2e-20 41