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Name : thyA (HMPREF0424_0404) Accession : YP_003373653.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : thymidylate synthase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0207 EC number : 2.1.1.45 Position : 433798 - 434670 bp Length : 873 bp Strand : + Note : identified by match to protein family HMM PF00303; match to protein family HMM TIGR03284 DNA sequence : ATGGCTTTAACAGAAGAAGAACTTGTCGCAATTCGCGCGCGCGTACCACAAAAACCGCTTTCCAGCATCCCAACTCCTTA CGAGGATTTAGTGCGAAATATCCTTACGGAAGGCACTTTAAAATCAGATCGTACAGGCACTGGCACGATTTCGCTTTTTG GCCAGCAAATCCGCTTCGATATTAGCAAATACTTCCCGCTGATTACCACGAAAACCGTGTTTTTCAAAGGACTTGCGTAC GAGCTGCTTTGGTTCCTTAAAGGCTCGAGTAATGTGCGTTGGTTGCAAGAAAACGGCGTTCATATTTGGGACGAGTGGGC GGACGAAAACGGCGATTTGGGCCCTGTTTACGGCGTGCAGTGGAGGAGTTGGCCGGCTCCGACAGCGGAAAATCCAAACC GCACAATCGACCAAATCGCAAACGTTCTGGATCTTATGAAGAATCACCCAGATTCTCGCCGCATGATTGTTAGCGCTTGG AACCCTGCGGAAGTTGAACATATGGCGTTGCCGCCTTGCCACTCGCTTTTCCAGTTCTACGTTGCTGACGGCAAGCTTTC GTGCCAGCTTTACCAGCGTTCTTGCGACATGTTCCTCGGCGTGCCGTTTAACATTGCATCCTACTCGCTTTTGACGATGA TGATGGCTCAGCAGGCAGGCCTTGAGCCAGGCGAGTTCGTGTGGACGGGCGGCGATTGCCATATTTACGACAATCACGTT GAGCAGGTGCTCGAGCAGCTTTCGCGCGAGCCATACCCGTATCCGCAACTTGAAATTCGTAAGGCGGATTCGATTTTTGA CTACGATTACAGCGATTTTAAGGTGGTTGAGTACAAGCATCATCCGACGATTAAAGCGCCGGTTGCGGTGTGA Protein sequence : MALTEEELVAIRARVPQKPLSSIPTPYEDLVRNILTEGTLKSDRTGTGTISLFGQQIRFDISKYFPLITTKTVFFKGLAY ELLWFLKGSSNVRWLQENGVHIWDEWADENGDLGPVYGVQWRSWPAPTAENPNRTIDQIANVLDLMKNHPDSRRMIVSAW NPAEVEHMALPPCHSLFQFYVADGKLSCQLYQRSCDMFLGVPFNIASYSLLTMMMAQQAGLEPGEFVWTGGDCHIYDNHV EQVLEQLSREPYPYPQLEIRKADSIFDYDYSDFKVVEYKHHPTIKAPVAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thyA | YP_001800914.1 | thymidylate synthase | Not tested | Not named | Protein | 1e-92 | 71 |
