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Name : rph (HMPREF0424_0339) Accession : YP_003373593.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : tRNA nucleotidyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 367006 - 367767 bp Length : 762 bp Strand : + Note : identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 DNA sequence : ATGACTCAAATCAAGGATATGTTGGAATCTGTAAAACCAATTCGCGTTGACGGTCGTGATGTTGACGAGCTCCGACCTGT GCACATAACACGTAAATTTACTGATGTTCCTGAAGGCTCTGTGCTTATTGAGTGTGGCAATACGCGCGTAATGTGTACCG CAACTTTTACGGTTGGTGTGCCTCGTTGGCGTAGAGATTCCGGTTTGGGTTGGGTAACTGCCGAATATTCTATGCTTCCT AGAGCAACAGCTGAGCGAACTGATCGCGAATCTGTGCGTGGAAAAATTGGTGGTCGCACTCACGAAATTAGTCGTCTTAT TGGTCGCTGCTTGCGCGGTGTAGTCGATATGAAAGCGATGGGTGAGTGCCAGATTCAAATTGATTGCGACGTGTTGCAAG CGGATGGTGGAACTCGTACTGCTTCCGTAACTGGAGCTTATGTAGCTTTGGTAGATGCGCTTCATTGGGCAGAAAAGAAT GGTCATATTCGCTCTGCTGCAAATGTTATTAAGGATTCTATTTCCGCTGTTTCTGTAGGCGTTATTAACGGCACTCCTAT GCTGGATTTGCCTTATGTTGAGGACAGTCAAGCTATGACAGATATGAATGTAGCTATGACAGGTTCCGGTACTTTCATTG AAATTCAGGGCACTGCAGAACATCGTCCATTTAATCGCGACGAATTAAATACGTTACTTGATTTGGCAACTAAAGGTAAT CGCGAATTGCAAGCTGCTCAAAAAGCCGCTTTAGCAAAATAG Protein sequence : MTQIKDMLESVKPIRVDGRDVDELRPVHITRKFTDVPEGSVLIECGNTRVMCTATFTVGVPRWRRDSGLGWVTAEYSMLP RATAERTDRESVRGKIGGRTHEISRLIGRCLRGVVDMKAMGECQIQIDCDVLQADGGTRTASVTGAYVALVDALHWAEKN GHIRSAANVIKDSISAVSVGVINGTPMLDLPYVEDSQAMTDMNVAMTGSGTFIEIQGTAEHRPFNRDELNTLLDLATKGN RELQAAQKAALAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-64 | 61 |
