Gene Information

Name : nrdI (HMPREF0424_0178)
Accession : YP_003373442.1
Strain : Gardnerella vaginalis 409-05
Genome accession: NC_013721
Putative virulence/resistance : Unknown
Product : NrdI protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1780
EC number : -
Position : 198578 - 199078 bp
Length : 501 bp
Strand : -
Note : identified by match to protein family HMM PF07972; match to protein family HMM TIGR00333

DNA sequence :
ATGTGTGAGCAAGAAAATATAACACAACAAAGCGAACCAGAATCTAGCGCACAAGGTGAATCAATCGGAGCTGTAGTCTA
CTTTTCCTCAGTTTCCGAAAATACGTTAAGATTTGTGCAAAATTGCGATTTTCCAAGCAATAACGTGAACGTATATCGCA
TACCGCTTCGTCCTAAAGAACCGGAATTAAACGTGCGCGAACCGTATGTTTTGATTGTTCCAACTTACGGCGGTGGAAAT
ATTGCGAAAGCAATACCGATGCAAGTTCGCAAATTCTTAAATAATCGCGAAAATCGTTCGTTTATTCGCGGAGTAATTTC
TTCCGGAAATACGAATTTTGGAGAAGCATATTGCGCTGCAGGTGATCAAATTGCAGGAAAGTGTGGAATCCCAAATATGT
ACTCGTTTGAACTTACGGGAACTGCAGAAGATATAGAAAAAGTAGCGCAGGGCATACCGAGATTTTTAAAACAACTCAAA
GAAACAGAAGAAACAAAATAA

Protein sequence :
MCEQENITQQSEPESSAQGESIGAVVYFSSVSENTLRFVQNCDFPSNNVNVYRIPLRPKEPELNVREPYVLIVPTYGGGN
IAKAIPMQVRKFLNNRENRSFIRGVISSGNTNFGEAYCAAGDQIAGKCGIPNMYSFELTGTAEDIEKVAQGIPRFLKQLK
ETEETK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nrdI YP_001800876.1 ribonucleotide reductase stimulatory protein Not tested Not named Protein 1e-27 46