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Name : HMPREF0424_0177 (HMPREF0424_0177) Accession : YP_003373441.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : ribonucleoside-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 196267 - 198492 bp Length : 2226 bp Strand : - Note : identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF08343; match to protein family HMM TIGR02506 DNA sequence : ATGAATAGCACGGATCCGATGAGCGAATCTACTTCGCTTAATCTTGATCACACTGATTCTGCAAGCGCAACTGCCAGTAC AACAGCAGAGCGCATCCGCAACAGCCGCGACTACCACGTTCTTAACGCTATGCTCGGTCTTTTTGACCCAGAAAAAGGCA TTCAGTTTGATAAAGATCAAGAAGCAGAAAAGCTTTACGTTTCGGGTTACGTGCAAGAACATAGCATGAAGTTTGCTTCA ACTCGCGAGCGCTTGAACTATTTGATTGACAACTATTACTACAACGGTAACGTATTCAACAAATACAGCGATGAATTTCT CGATAAATTCTACGAGCATGCGGAAGCCGCACACCACACTTTTGGCACATTCTTGGGTGCTTTTAAGTTCTACACTTCTT ACGCTTTGAAGACTTTCGACGGCAAGCAGTATTTGGAAAACTTCGCTCAGCGCGCAGCTGCTGTTGCATTGGAACTTGCA GATGGTGACGAAAAAGCAGCGACCAACTACTTAGACGAAATGCTTGCAGGCCGCTTCCAGCCAGCCACCCCAACGTTCTT GAATCTTGGTAAAGCTCAGCGCGGCGAAGCTGTGAGCTGCTTCCTCGTGCGTTTGGAAGATAACATGGAGTCTATTGCGC GCGGAATTAATTCTGCTTTGCAGCTTTCTAAGCGTGGCGGCGGCGTGGCTCTGCTTCTTACGAATTTGCGCGAGCTTGGC GCTCCTATTAAGCGAATCGAGAATCAGTCGAGTGGCGTTGTGCCTGTTATGAAGCTTTTGGAAGATTCATTCTCTTACGC TAATCAGCTTGGCGCTCGACAGGGTGCAGGTGCAGTGTATATTAGCGCGCATCACCCAGATATTATGCGTTTCCTCGATG CTAAGCGCGAGAACGCAGACGAGAAGATTCGTATTAAGTCGCTTTCTTTGGGTGTTGTGATTCCAGATATTACTTTTGAG CTTGCTAAGCGTAAGGAAAAGATGGCTTTGTTTAGTCCTTACGATGTTGAGCGCGAATATGGCAAGCCTTTTGCAGATAT TTCTGTTACCGAGCATTACGATGAGATGGTTGCAAATCCTCGTATTCACAAGAAGTACATCGACGCTCGCGAATTCTTTA TGACGATTGCAGAAATTCAGTTCGAGTCTGGCTATCCTTACATTTTGTTTGAGGATACTGTGAATCGCACGAATCCTATT GAGGGTCGCATTACTATGAGCAACTTGTGCTCTGAGATTTTGCAAACTCAGGAAGCAAGCACTTATAACGCCGACTTGTC TTATAGCCACGTTGGTCGCGATATTTCTTGCAATCTTGGCTCTCTTAATATCGCTAAGGCAATGGATGGCGACTTGGGCA CAAGCGTTGATTTGGCTGTGCGTGCGCTCACTTCTGTTTCGGAGCATACTTCTATTGATTCTGTGCCTTCGATTCGTCGC GGTAACGCGGAAGGTCACGCTATTGGCTTGGGTCAAATGAATTTGCACGGTTTCCTTGCGCGTGAACACATGCAGTACGG AAGCGAGGAAGCTCTTGACTTTACAGACATGTACTTTATGACGGTTGCTTACCACGCTTATAAGGCTTCTCACGCTTTGG CTGTAGAGCGCGGCCACGCTTTTGCAAACTTTAAGACGAGCGCTTACGCTAAGCCTGCAGGAAAAGGCAACTACTTCGAT AAGTACACAGATGGCAGCCGCTCGCTTGAGCCTAAAACTCAAAAAGTTCGCGATTTGTTTGCCCGTTTTAACGTTGCGAT TCCAACCGTCAGCGATTGGGAGCAGTTGCGCGACGAGATTTTGAGCGATGGCATTTACAACGAGTATTTGCAAGCTGTTC CTCCAACTGGCTCAATCTCGTACATCAACCATTCCACAAGTTCAATCCACCCGATTGCTTCTCGCATTGAGATTCGCAAA GAAGGCAAGGTTGGACGCGTCTACTACCCTGCTGCATACATGACGAACGACAATATGCAGTACTTTAAGGACGCCTATGA GATTGGCTGGAAGGCAATTATTGACACTTATGCCGAAGCAACTCAGCATGTGGATCAAGGATTGTCGCTTACTTTGTTCT TCCCAGACACTACGACTACTCGCGATTTGAACAAGGCTCAGATTTACGCATGGCGTAAGGGCATTAAGACTCTTTACTAC ATTCGTATTCGCCAGAAGGCTTTGGAAGGTACGGAAATCGAAGGTTGCGTAAGCTGCACGCTGTAA Protein sequence : MNSTDPMSESTSLNLDHTDSASATASTTAERIRNSRDYHVLNAMLGLFDPEKGIQFDKDQEAEKLYVSGYVQEHSMKFAS TRERLNYLIDNYYYNGNVFNKYSDEFLDKFYEHAEAAHHTFGTFLGAFKFYTSYALKTFDGKQYLENFAQRAAAVALELA DGDEKAATNYLDEMLAGRFQPATPTFLNLGKAQRGEAVSCFLVRLEDNMESIARGINSALQLSKRGGGVALLLTNLRELG APIKRIENQSSGVVPVMKLLEDSFSYANQLGARQGAGAVYISAHHPDIMRFLDAKRENADEKIRIKSLSLGVVIPDITFE LAKRKEKMALFSPYDVEREYGKPFADISVTEHYDEMVANPRIHKKYIDAREFFMTIAEIQFESGYPYILFEDTVNRTNPI EGRITMSNLCSEILQTQEASTYNADLSYSHVGRDISCNLGSLNIAKAMDGDLGTSVDLAVRALTSVSEHTSIDSVPSIRR GNAEGHAIGLGQMNLHGFLAREHMQYGSEEALDFTDMYFMTVAYHAYKASHALAVERGHAFANFKTSAYAKPAGKGNYFD KYTDGSRSLEPKTQKVRDLFARFNVAIPTVSDWEQLRDEILSDGIYNEYLQAVPPTGSISYINHSTSSIHPIASRIEIRK EGKVGRVYYPAAYMTNDNMQYFKDAYEIGWKAIIDTYAEATQHVDQGLSLTLFFPDTTTTRDLNKAQIYAWRKGIKTLYY IRIRQKALEGTEIEGCVSCTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 0.0 | 67 |
