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Name : HMPREF0424_0176 (HMPREF0424_0176) Accession : YP_003373440.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : ribonucleoside-diphosphate reductase subunit beta Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0208 EC number : 1.17.4.1 Position : 195105 - 196184 bp Length : 1080 bp Strand : - Note : identified by match to protein family HMM PF00268 DNA sequence : ATGACAGAACTCAGCCCAACCGAGCTTAGAAGTAGCCTCGATAAGCCTTTCGGCACAAATCGCGTAATCGCAGATGACGC TATGATGGCAGCTTCTATCACACCATCTCAGTACCGCTACCATCACGGATCGCGCGTACGCCCAGTTAATTGGAATAATA TTGTTGACGACAAGGATTTGGACGTTTGGAATCGCCTTATTGCTAACTTCTGGCTTCCAGAAAAGGTTCCGCTGAGCAAC GATATTCCTTCTTGGCGTTCCCTCACCGATCTTGAGCGCAAGACCACTACTCGCGTTTTTACAGGCTTGACTTTGCTTGA TACCAGCCAGGCAACTATTGGCGAGCTTTGCCAGATTGAGCACGCTCGCACGGAGCACGAGCAGGCTATTTACACGAATA TTGCTTTTATGCAGTCGATTCACGCTCGCTCCTACTCCTCTATTTTCTCTACTCTTTGCTCTAGCGAAGAGATTGACGAA GCTTATCGTTGGGCTGTTGGCAACGACGTTTTGCAGCAGCGCGTCACCACTGTGCTTTGCGAGTATGAGAGCGAAGATCC GCTTAAGCGCAAGATTGCTGCAACTATGCTTTCTTCGTTGCTTCTTTACGCGGGATTCTATCTTCCGCTTTACTTTGCTT CTCGCGGCAAGATGATGAACACTGCCGATATGATTCGCTTGATTTTGCGCGATAAGGCAATTCACGGCTATTATTCGGGC TACAAGTTCCAGCGCGGTTTGGAGCTTAGAAGCGAGAACGATAAGAAGAATCTTGAAAAGTTCACTATGAACTTGCTCGA CACTTTGTATGATCTGGAAGTTGAGTATTCTGGTCAGATTTATGAAGGATTTGACTTCCACGATGACGTTTTTGACTTCG TGCGTTACAACGCTAACAAAGCTTTAATGAACCTTGGCTACCCTGCTAAGTACAGCGAAGAAGAAACTCACGTAAGCCCA GAAATTCTCGCTGCTCTTTCTCCTGCAGCCGACGAAAATCACGACTTCTTCTCCGGCTCTGGTTCCAGCTACATTATGGG CAAGTCAGTTGAAACCGACGACGATGATTGGGATTTCTAA Protein sequence : MTELSPTELRSSLDKPFGTNRVIADDAMMAASITPSQYRYHHGSRVRPVNWNNIVDDKDLDVWNRLIANFWLPEKVPLSN DIPSWRSLTDLERKTTTRVFTGLTLLDTSQATIGELCQIEHARTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSEEIDE AYRWAVGNDVLQQRVTTVLCEYESEDPLKRKIAATMLSSLLLYAGFYLPLYFASRGKMMNTADMIRLILRDKAIHGYYSG YKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYSGQIYEGFDFHDDVFDFVRYNANKALMNLGYPAKYSEEETHVSP EILAALSPAADENHDFFSGSGSSYIMGKSVETDDDDWDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1479 | YP_001800873.1 | ribonucleoside-diphosphate reductase subunit beta | Not tested | Not named | Protein | 1e-87 | 56 |
