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Name : asd (HMPREF0424_0130) Accession : YP_003373395.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : aspartate-semialdehyde dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0136 EC number : 1.2.1.11 Position : 149711 - 150778 bp Length : 1068 bp Strand : + Note : identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296 DNA sequence : ATGACAATTATCAACGAAAAAGGCGTGAACGTGGCAGTACTTGGCGCAACTGGCCAAGTTGGTATGGTAATGCGTCGAGT GCTTGACGAGCGCGATTTTCCAATAAAAGATTTACGTTTTATGGCTTCCGCTCATTCTGCTGGCACAGTTTTGCAATATC GTGGCAAAGACGTAGTCGTAGAAGATGTAGAAAAAGCAGATTTGCACGGAATTGACATAGCTATTTTTTCTGCAGGCGGC GGAACTTCAAAAATTTGGGCTCCGAAATTCGCTGAAGCTGGCGCAATTGTAGTAGATAATTCTTCGCAATGGCGTATGCA TAACGATGTGCCTTTGGTAGTTGCGGAAGTAAACCCTGAAGATTTAGATACTATTCCAAGAGGAATAGTAGCAAATCCAA ATTGCACAACTATGGCTTGCATGCCTGTATTAAAGCCGCTTGCTGATGCTTTTGGATTAAAACGTTTAATTGTTTCGTCT TACCAAGCTGTTTCTGGCGCCGGTCGAGCCGGTGCTTTGCAACTCATGAATGAGGCTCAAGCTGCATTAAACCAAGGAGC AGATAAACTCGTTTTCGACGGTAGTGCAATAGATTTCCCTGAACCTACAAAAGTTGCTTGTACTATTGCTTTTAATGTAG TGCCTTTTATTGGTTCAATAGTTGATGACGGTTCTGAAGAAACTGACGAAGAACAAAAATTGCGCAATGAAAGCCGTAAG ATTTTGCATTTGCCAAATCTTGCAGCCTCATGTACTTGTGTGCGCGTAGGTGTTTTCACTGGTCACGGCATGAGTGTAAA CGCTGAGTTTGAGCATGATGTAACTCCAGACATGGCTCGCGAAGTATTAAGCAAGGCTGAAGGAGTTGAGCTTAACGATA TTCCTACTCCTCAGCTAGCGGCAGGAAAGTCTGCAAGTTATGTTGGTAGAATTAGGCAAGACCAAGCGATCGATGGAAAT AAGGGATTGGCACTTTTCATCACTAACGATAATTTGCGAAAAGGTGCTGCACTAAATGCTGTGCAATTGGCTGAAATTAT TGCTAAAAAGCGTAATTTCCTAAACTAA Protein sequence : MTIINEKGVNVAVLGATGQVGMVMRRVLDERDFPIKDLRFMASAHSAGTVLQYRGKDVVVEDVEKADLHGIDIAIFSAGG GTSKIWAPKFAEAGAIVVDNSSQWRMHNDVPLVVAEVNPEDLDTIPRGIVANPNCTTMACMPVLKPLADAFGLKRLIVSS YQAVSGAGRAGALQLMNEAQAALNQGADKLVFDGSAIDFPEPTKVACTIAFNVVPFIGSIVDDGSEETDEEQKLRNESRK ILHLPNLAASCTCVRVGVFTGHGMSVNAEFEHDVTPDMAREVLSKAEGVELNDIPTPQLAAGKSASYVGRIRQDQAIDGN KGLALFITNDNLRKGAALNAVQLAEIIAKKRNFLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDB402_0195 | YP_005126708.1 | aspartate-semialdehyde dehydrogenase | Not tested | Not named | Protein | 5e-88 | 61 |
