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Name : HMPREF0424_1161 (HMPREF0424_1161) Accession : YP_003374359.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Unknown Product : sortase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3764 EC number : - Position : 1357478 - 1358611 bp Length : 1134 bp Strand : - Note : identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076 DNA sequence : GTGAGAAAAGAAAACCACTCAAACTCGCGCAACAACGCCAAAAACTGGCACTTCTCTAAGTCCTGCATAGTCCCTGCTTT GCTGTTGCTTGCATCGTTTGCGTCGCTTATTTATCCGCACGCCGCCATGTGGCTAAGCCAATACCACATGTCGGAAGTTG CTGCAGAGTATGCGAAGCTTATTACACACGCGGTTCCTGCTCCGCATGAGCAGCTCCGCCGCGCTCGTGAGTATAACAGT AAGCTTTCGTCGGGTGCTATTTACGAAGCGAATACGAATATTCCAACTTCGCATGGCGAAACGTCGGATGCTAGTCAGGA TTATTGGGATCAGTTGAAAGTGAACGACGACGGGTTGATGGCTCGTTTGCGAATCAAAAAAATTGATCTTGATTTGCCTG TGTATCACGGCACAGAGGATGCCACGTTGCTTAAGGGTCTTGGTCATTTGCGTGGAACTTCGCTTCCGGTTGGCGGCAAG GGGACGCGCTCTGTGATTACTGGGCATCGCGGTTTGGCAAGTGCGGAAATGTTCACCAGGCTGGATGAAGTTGGAAAAGG TGATACTTTTACGATTGAGGTTTTCGACGAGATTCTTACCTACAAGGTTGTTGACAAGATCGTTGTAAACCCTGATGAGA CGAAGAAGATTGCAGCCGTTCCTGGTAAGGATTTGATGACGCTGATTACTTGTACGCCGCTTGGCATTAACACGCAGCGC ATTTTGGTTACTGGTGAACGCGTGGTGCCAACGCCTGCGGCAGACAAAGCACTTCGAGGTAAAAAGCCTGATGTGCCGCG ATTCCCGTGGTGGATTGTTGCTTGCTTTGGAAGCTTGTGTATTGTTGGCGGCTACATTTGGTGGGCTGGTTTGCCTGTAA AGAAGAAAAAGAAAACTGAAAAGAGCGATGCTGCTGCGGATGCGTCTGCTGCTACTAGTGACGACATAAGTGCAGAAAGC TCATCGACTAGCACGGTAAGCAGTGCGGATCTTGTGCTCGAGGAAGCTAAGGCGATTAAAAATCGTCCGAAAAAACGGAC GAAAGTCAAAAAGTCTAGTTTGCGCAAGAAACGCAAGCGGAGTGGTCACGGCGAAAAGACTTTCGACTGGCTTATAAGCA TCCTTGGTTTATGA Protein sequence : MRKENHSNSRNNAKNWHFSKSCIVPALLLLASFASLIYPHAAMWLSQYHMSEVAAEYAKLITHAVPAPHEQLRRAREYNS KLSSGAIYEANTNIPTSHGETSDASQDYWDQLKVNDDGLMARLRIKKIDLDLPVYHGTEDATLLKGLGHLRGTSLPVGGK GTRSVITGHRGLASAEMFTRLDEVGKGDTFTIEVFDEILTYKVVDKIVVNPDETKKIAAVPGKDLMTLITCTPLGINTQR ILVTGERVVPTPAADKALRGKKPDVPRFPWWIVACFGSLCIVGGYIWWAGLPVKKKKKTEKSDAAADASAATSDDISAES SSTSTVSSADLVLEEAKAIKNRPKKRTKVKKSSLRKKRKRSGHGEKTFDWLISILGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| srtH | YP_005126713.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 1e-59 | 47 |
| srtH | YP_005139151.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 3e-52 | 45 |
