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Name : glnA_2 (HMPREF0424_1140) Accession : YP_003374339.1 Strain : Gardnerella vaginalis 409-05 Genome accession: NC_013721 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1317205 - 1318641 bp Length : 1437 bp Strand : + Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGACCACTTTGCAAACTAAAGAAGATGCCGCAGCCCTTATTGAAAAGGAAGGCATTGAGTACGTATCCGTACGATTTAC TGATTTAATTGGCGTTCAGCAGCACTTTACTGTTCCTGCTGACGAGTTCTTACACAGCGCTTTCACTGATGGAATGGCGT TCGATGGTTCTTCAATGCAAGGCTTCCAGGCTATTAACGAATCAGATATGAAGCTTATTCCAGATGTTGACACTGCTTAT ATTGACCCATTCCGTAAGCATAAGACTCTGAATATTGCTTTCTCTATTGTTGACCCTGTAACAGATGAGCCATATTCTAG GGATCCTCGTCAGGTCGCTATTAAAGCAGAATCCTATTTGAAATCAACTGGCATTGCTGACACTGCAAGCTTTGCCCCTG AAGCTGAGTTCTTCATCTTTGACAAGGTGCGTTTTGCTAACGACATGCAGCGCTCCTTCTATGAGGTTGATTCTAACGAA GCTCCTTGGAATTCTGGCATCGACACTGAAGATGACGGTAGCAACAATATTGGTTTTAAGAATCGAGTAAAGCACGGCTA CTTCCCTGTGCCACCAGTAGATCACAATCAGGATTTGCGCGATGACATGGTTTACAACTTGCAAAAAGTTGGTTTGATTC TTGAGCGTTCTCACCACGAAGTCGGCGGCGCAGGTCAGCAGGAAATCAACTACCGTTACAATACGCTTGTTCATGCTGGC GATGATTTGATGAAATACAAGTATGTGGTTCATGAAACTGCTGCTTTAGCTGGTAAGGCTGCAACATTTATGCCAAAGCC AATTGCTGGAGATAACGGCACTGGCATGCACTGCCATCAGTCGCTTTGGAAAGATGGCAAGCCATTGTTCTATGCGGAAA CTGGCTACGCTCAACTTTCTGATATTGCACGTTGGTACATTGGCGGCTTGATTAAGCACGCTTCTTCTGTGCTTGCATTT ACGAATCCTTCGCTTAACTCTTACCATCGCTTGGTTCCAGGATACGAAGCTCCAGTCAACTTGGTTTACTCTGCTCGTAA CCGTTCTGCAGCTATTCGTATCCCTCTTGCTGGTACAGAACCTGCTGCTAAGCGTATTGAGTTCCGTGCACCGGATCCTT CATGCAACCCATTCTTAGCATTCTCCGCTCAGCTTATGGCAGGTTTGGATGGTGTTATTAACCATATTGAGCCTCCTGCC CCTGTTGATAAAGATTTGTACGAGCTTCCTCCAGAGGAGCATGACGGCATTAAGCAAGTTCCTTCTTCGCTTGGTGAAGC TTTGCAATCTTTGGAAGAGGATCACGACTTCCTTATGCAAGGCGACGTATTTACTAGCGACTTGATTGAAACTTGGCTGA ATTTGAAGCATGAGGAAATGGATATGGCTCGCTTGGCTCCAACTCCACTCGAGTATGAGCTTTACTTCCACATCTAA Protein sequence : MTTLQTKEDAAALIEKEGIEYVSVRFTDLIGVQQHFTVPADEFLHSAFTDGMAFDGSSMQGFQAINESDMKLIPDVDTAY IDPFRKHKTLNIAFSIVDPVTDEPYSRDPRQVAIKAESYLKSTGIADTASFAPEAEFFIFDKVRFANDMQRSFYEVDSNE APWNSGIDTEDDGSNNIGFKNRVKHGYFPVPPVDHNQDLRDDMVYNLQKVGLILERSHHEVGGAGQQEINYRYNTLVHAG DDLMKYKYVVHETAALAGKAATFMPKPIAGDNGTGMHCHQSLWKDGKPLFYAETGYAQLSDIARWYIGGLIKHASSVLAF TNPSLNSYHRLVPGYEAPVNLVYSARNRSAAIRIPLAGTEPAAKRIEFRAPDPSCNPFLAFSAQLMAGLDGVINHIEPPA PVDKDLYELPPEEHDGIKQVPSSLGEALQSLEEDHDFLMQGDVFTSDLIETWLNLKHEEMDMARLAPTPLEYELYFHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 1e-82 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA_2 | YP_003374339.1 | glutamine synthetase, type I | VFG1399 | Protein | 1e-143 | 62 |
