Gene Information

Name : Psta_0644 (Psta_0644)
Accession : YP_003369190.1
Strain : Pirellula staleyi DSM 6068
Genome accession: NC_013720
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 797813 - 798625 bp
Length : 813 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xom:XOO_2181 ABC transporter ATP-binding protein

DNA sequence :
ATGGCAGGACTACTAAGCTCGCTTCGCAGCGATCAGAAGCATGCAAACTCCACCGGCAAACCAAACGCCGCAGGAGCCGA
GAAATCGACCCGCATCGATCAGCCGACCAAGAGCAACGCTCCGGCGATTTTGCGAGCACGTGGGCTCCACAAGAGCTATC
GCAAAGGGAAGATCGAAGTGCCGGTGCTCCGCGGGGTCGATCTCGACCTGCGAAAAGGAGAACTCGTTTCGATCGTCGGT
CAAAGTGGTTGCGGCAAAACGACGCTGCTCCATCTGCTCGGCACACTCGACCAGCCCGACCAGGGTGAAATTCATTTTGC
CGGCGAGCGGATCGACAAGCTCGCGCCGCGCTTGCGCGATAAGCTTCGCAATCAAAAGCTCGGCATGATCTTTCAGTTCT
ATCATCTGCTTCCCGAGCTCTCGACGCTCGAAAACGTCCTCACCCCGATCATGATCAGCCAAGGGGTGTTTCAGTACCTG
CGCTATCGCCGCGCTCATCAGCAGCGCGCCAAAGAGCTGCTCGAACTGGTTGGTCTTGGGCATCGTTTAACCCATAAGCC
GCAGGAACTATCGGGGGGTGAGATGCAGCGGACCGCGATTGCTCGCGCGCTGATTCAGCAGCCCGAGCTGCTGCTGGCCG
ACGAACCGACCGGCAACCTCGACCGAAAAACGGGGGAGGGGATCCTCGAAATTCTGCGAACCCTCAACCGCGAGCAGGGT
CTTACCATCGTCATGGTGACCCACGACCAGGCGATCGCCAAAGCGGCCGATCGGAGCGTGCAGCTGGTCGAAGGGGTGGT
CGATCACGGCTAG

Protein sequence :
MAGLLSSLRSDQKHANSTGKPNAAGAEKSTRIDQPTKSNAPAILRARGLHKSYRKGKIEVPVLRGVDLDLRKGELVSIVG
QSGCGKTTLLHLLGTLDQPDQGEIHFAGERIDKLAPRLRDKLRNQKLGMIFQFYHLLPELSTLENVLTPIMISQGVFQYL
RYRRAHQQRAKELLELVGLGHRLTHKPQELSGGEMQRTAIARALIQQPELLLADEPTGNLDRKTGEGILEILRTLNREQG
LTIVMVTHDQAIAKAADRSVQLVEGVVDHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psta_0644 YP_003369190.1 ABC transporter NC_012469.1.7686878. Protein 1e-34 44
Psta_0644 YP_003369190.1 ABC transporter NC_008702.1.4606598. Protein 4e-31 42
Psta_0644 YP_003369190.1 ABC transporter NC_012469.1.7685735. Protein 8e-34 41