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Name : Psta_0534 (Psta_0534) Accession : YP_003369081.1 Strain : Pirellula staleyi DSM 6068 Genome accession: NC_013720 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 657189 - 658907 bp Length : 1719 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_5788 type IV-A pilus assembly ATPase PilB DNA sequence : ATGGCCATTCGCCGCATCGGACAAATCTTCGTCGACATGGGCTTCATCAGCGATGACCAGCTCGAGATGCTGCTCGAAGA ACAGCAGCAGCGACCTGGCACGCTCTTGGGCAAACTTGCGCAAGAGATGAGCCTCGTCAATGAAGAACAGTTGGTGCAAG CGCTCGCCGAACAGATGGGGATGCAAGTGGTCGAGCTTGGGGATATCACGATTCCCGGCGACGTGCTCCACAAAGTGACC GAGTCGATGGCGCAGCTCTATCGCGTCATTCCGATCAAGTTCAGTAGCAACGAACTGACGGTGGCGACGTGCGATCCGCA AAACATCACGATCCAAGACGAACTCCGCTCGATGCTCGGCTACGACATCCGTGTGGTGATCGCCTCGGAAACCGATATCA AGAAAACGCTCGATCGCTACTTCTCGTCCGACAAAGATACGGTCGATAGCATCGTTGGCGAGCTCGAAGCCGACAGCGAA CTGAAGAAGGCGATGGATGCCGTCGCTAAGAACGGCGCAGTCGATCTGACGAGCGTCGAAGCGCTGGCCGATAGCGCGCC GGTTCGCAAGCTGCTGAACATGGTGCTGCTGCTGGCAATTAAGGATCATGCGAGCGACATTCACTTCGAACCGTTTGAAG ACGAATTCCGCATCCGCATCAAGGCCGATGGTGTGCTGTTTGAAATGGTGCCACCGCCGCGGCATCTGGCGTTTGCGATC ACCACGCGCATTAAGGTGATGGCGAACCTCGACATCGCCGAACGACGCATGCCTCAAGATGGTCGTATCGAACTATCGGT CGGTGGTCACTCGGTCGACCTTCGCGTCAGCATTCTGCCGACTCTGTTTGGCGAGAGCGTGGTTATGCGAGTCCTCGACC GTTCGGTCGTTTCGCTCAACCTGGCTAAGGTGGGGATGGATGCGCCAACCCTCAAGCTATTCCGCAGCGTGCTCGATCGT CCCAACGGCATCGTGCTGGTGACAGGTCCGACAGGTTCGGGCAAAACCACGACCCTCTACTCGGCACTCAGCGAACTCAA CTCGGTCGAAGACAAACTCATCACCACCGAAGACCCGGTGGAATACGACATCGATGGGATCGTGCAGATTCCGATCGATC ACGAAATTGGTGTGACCTTCGCCGCTTGCCTACGAGCGATTTTGCGACAAGATCCCGACATCATTCTGGTGGGTGAGATC CGCGATCTCGAGACCGCCGAAATTGCGGTGCAAGCCTCGCTGACAGGTCACATGGTGTTCAGCACGCTCCACACCAACGA CGCGCCGAGCACTGTCACACGCCTCAAAGATATGGGTGTGCCGACGTTCCTTATCACTGCCACGGTCGAAGCGATTTTGG CCCAGCGATTGGTGCGCCGCATCTGCTCGCAGTGCCGCGAAGAAGTCGAAGGCTCGGAAGAACTGCTGGCCGAAGTGAAG TACACCGCCGAACAACTCGCGGGGAAGAAGTTCTACCGTGGGCGGGGCTGCGATGTCTGCAACAACACCGGCTACAAGGG ACGCGTCGGTCTGTTCGAACTGATGATCATGAACGACACGCTGCGCGACATGGTGATGCAAAACGCGTCGATCGACGATC TCCGCACCACGGCCTCCAGCTTTGGCATGTCCACGCTGCGCGACGTCGGCATGCGGAACGCCTTCGATGGCACCACCACG CTCGACGAAGTGGTCCGCGAAACAGTTCAAGAAGCGTAG Protein sequence : MAIRRIGQIFVDMGFISDDQLEMLLEEQQQRPGTLLGKLAQEMSLVNEEQLVQALAEQMGMQVVELGDITIPGDVLHKVT ESMAQLYRVIPIKFSSNELTVATCDPQNITIQDELRSMLGYDIRVVIASETDIKKTLDRYFSSDKDTVDSIVGELEADSE LKKAMDAVAKNGAVDLTSVEALADSAPVRKLLNMVLLLAIKDHASDIHFEPFEDEFRIRIKADGVLFEMVPPPRHLAFAI TTRIKVMANLDIAERRMPQDGRIELSVGGHSVDLRVSILPTLFGESVVMRVLDRSVVSLNLAKVGMDAPTLKLFRSVLDR PNGIVLVTGPTGSGKTTTLYSALSELNSVEDKLITTEDPVEYDIDGIVQIPIDHEIGVTFAACLRAILRQDPDIILVGEI RDLETAEIAVQASLTGHMVFSTLHTNDAPSTVTRLKDMGVPTFLITATVEAILAQRLVRRICSQCREEVEGSEELLAEVK YTAEQLAGKKFYRGRGCDVCNNTGYKGRVGLFELMIMNDTLRDMVMQNASIDDLRTTASSFGMSTLRDVGMRNAFDGTTT LDEVVRETVQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-90 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-90 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psta_0534 | YP_003369081.1 | type II secretion system protein E | VFG1876 | Protein | 1e-91 | 45 |
| Psta_0534 | YP_003369081.1 | type II secretion system protein E | VFG0182 | Protein | 2e-89 | 44 |
| Psta_0534 | YP_003369081.1 | type II secretion system protein E | VFG2048 | Protein | 4e-90 | 42 |
| Psta_0534 | YP_003369081.1 | type II secretion system protein E | VFG0112 | Protein | 1e-93 | 41 |
| Psta_0534 | YP_003369081.1 | type II secretion system protein E | VFG1880 | Protein | 7e-90 | 41 |
