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Name : Psta_0532 (Psta_0532) Accession : YP_003369079.1 Strain : Pirellula staleyi DSM 6068 Genome accession: NC_013720 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 653475 - 655196 bp Length : 1722 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: aba:Acid345_1392 type II secretion system protein E DNA sequence : ATGGCTCGTAAGGGCGATTTCACCGAGATTCTTCTCCGCCGACGCGTTGTTAGCCAAGATCAGCTGAACGAAGGCCGGCA AGTTGCCAAAGACACCAACGCCAACCTGTCGGATGTGCTGATCCGTCTGGGTTACGCCTCGGGCGAGGATGTGATGCGGG CTGTCGCCCAGGAGCATGGCCGCGAATACGTCGATCTCAGCGAAGTGACGATCCCGGAAGATGTGATCGAACTCGTGCCA GAATCGGTGGCTCGCGAAAATGCGATCCTCCCTCTCTCGGAGGACGAAGACAGCCTAAAGGTAATCGTGAGCGACCCTTA CGACATCGACACGATTGAAAAGCTCCGCTTCATTCTGAACCGCAAGGTCGATATCGCCCTGGCACCTCGCGAAAAGATCT TGGAAGCGATCAATAAGTACTACAGCCAAATCGAAGGTGAATCGGCTGACTCGGTGCTCCAAGAGTTCACCGATACGGCC ATTGATTTCACCGAAACCGAGGCGACCAAAGTCACTTCGAACGAAGCGGTCGACGAAAATAGCGCGCCGATCGTTCGTCT GGTGCAGCTGATGATCGGCGAAGCGGTGCAGCTCCGCGCGTCGGATATCCACGTCGAGCCGTTCGAAGAAATCGTGCGTA TACGCTATCGCATCGATGGTATTTTGCACAAACGCGATTCACCCCCCCGACGGCTATTGGCGGCGATTGTCAGCCGCATC AAGATTCTGGCGAAGATGGATATCGCCGAGCGTCGCCGTCCTCAAGACGGTCGTATCAAGGTGACCGTGGGTGAGAAGGA ACTCGATCTTCGCGTCAGCATCATCCCCACCAACCATGGCCAGTCGGTCGTTATGCGACTTCTGGACAAGGACAATATTA AGGTGGGCGTGCGGCAGCTCGGGTTCAGCGAGGACATGTTCTCGACGTTCCAGAGTCTGATCAAACGTCCCAACGGCATT GTGCTGGTGACCGGACCGACAGGTTCGGGAAAGACCACCACGCTCTACGCCGCGCTCAACTCGATGAACCGGCCCGACAA AAAGATCATTACGGCCGAAGACCCTGTGGAATACTACCTGCCGGGGGTCAATCAGGTGGAAGTGCGGCACAGTATTGGGC TCGACTTCGCCCGCATTATTCGCGCGATGTTGCGTCAGGCACCCAATGTGATTCTGGTGGGTGAGATGCGAGACTCGGAA ACCGCATCGATGGGTATCCAGGCTTCTCTTACTGGACACTTGGTTTTCAGTACACTACATACGAACGATGCGCCCAGTGC TGTAACACGCATGACCGACATGGGCGTTCCCGGGTATCTGGTCGCCAGCTCGGTGATCGCGGTGCTTGCCCAGCGTCTGG TGCGTCTGAATTGCAGCCGCTGCAAGCAACCCACCACCCTCAGCGAAGCGGTGCTGAACGACGCCGGCATCACCCCCAAA ATGGCAGCTGCAGCGACCTTCATGAAAGGCCGTGGCTGTGGTCACTGCAACAAGAGTGGCTACAAGGGTCGCCAAGGCAT TTTCGAATTGATGCTCATCCAGTCGAAGATCCGCGAGCTCATCTTCAAGAACGCTTCGAGCACCGAAATTCGCCGCATGG CGATCAAACTCGGCATGAAAACCCTTTACAGCGACGGCATTTACAAAACGTGCAAAGGGATAACGACCCTCGACGAGGTC TACCGTAACGCCAAACGGACGGAGCAGGACGTTTTCGAATAA Protein sequence : MARKGDFTEILLRRRVVSQDQLNEGRQVAKDTNANLSDVLIRLGYASGEDVMRAVAQEHGREYVDLSEVTIPEDVIELVP ESVARENAILPLSEDEDSLKVIVSDPYDIDTIEKLRFILNRKVDIALAPREKILEAINKYYSQIEGESADSVLQEFTDTA IDFTETEATKVTSNEAVDENSAPIVRLVQLMIGEAVQLRASDIHVEPFEEIVRIRYRIDGILHKRDSPPRRLLAAIVSRI KILAKMDIAERRRPQDGRIKVTVGEKELDLRVSIIPTNHGQSVVMRLLDKDNIKVGVRQLGFSEDMFSTFQSLIKRPNGI VLVTGPTGSGKTTTLYAALNSMNRPDKKIITAEDPVEYYLPGVNQVEVRHSIGLDFARIIRAMLRQAPNVILVGEMRDSE TASMGIQASLTGHLVFSTLHTNDAPSAVTRMTDMGVPGYLVASSVIAVLAQRLVRLNCSRCKQPTTLSEAVLNDAGITPK MAAAATFMKGRGCGHCNKSGYKGRQGIFELMLIQSKIRELIFKNASSTEIRRMAIKLGMKTLYSDGIYKTCKGITTLDEV YRNAKRTEQDVFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-88 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-88 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psta_0532 | YP_003369079.1 | type II secretion system protein E | VFG2048 | Protein | 2e-88 | 41 |
