|
Name : Psta_4270 (Psta_4270) Accession : YP_003372778.1 Strain : Pirellula staleyi DSM 6068 Genome accession: NC_013720 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 5577034 - 5579643 bp Length : 2610 bp Strand : + Note : KEGG: glo:Glov_1145 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair pro DNA sequence : ATGGCCGTTACCCCCATGATGCAGCAGTATCTCGATGCGAAGCAAGCGTGCGGCGATGCGCTCCTCTTGTTTCGCATGGG AGATTTCTACGAACTGTTCCACGACGATGCCCGCACTGCTTCGCGCGTGCTGGGGCTCACCCTGACGACGCGCGACAAAG GGGAAAATCCGGTCCCGATGGCCGGCTTTCCCTACCATCAGCTCGAAGGCTATCTGGCCAAGCTGATCGGCGGCGGCCTG CGTGCAGCGGTGTGCGAGCAAGTGGAAGATCCACGCCAAGCCAAGGGGCTGGTGAAGCGCGAAGTGACACGTGTGGTCAC TCCCGGCACACTGACCGACGACGCCCTGCTCGACCCGCGCGAAAGCAACTACCTGGCGGCGATGGTGCTCCCCGATACGC TTCAGCCGCACACGCCGGTGGGACTCGCTTGGGCTGATCTGTCGACCGGAAGGTTTCAAGCAGCGGTGTTTCCCTTCGCG CGGCTCGGCGATGAACTCGCGCGGCTGCAGCCTTCGGAATGCCTGCTGGGAGATGATCAGCCTCCCCCAACTTGCCCGTT CCCGCCACGGATGATGATCACCCGTCGGCCCGAGTGGACCTTCGCCCGCGATACGTCGCAAGCGGTACTCCAAAAACAGC TGCAGGTCGCCTCGCTCGAAGGGTTTGGCTTCGACGAGAGTGACATGCTGGCCATTCGCGCTGCGGGGGGAATTCTCGAG TACCTGCGCGAGACCCAAAAAACTTCGCTCGATCACATCGATCGTTTGCTGCCGTATCGCTCGGGGGAATCGCTCGAAAT CGATGAAGCGACCCGGCGCAGCCTCGAGATCACGCGGACCTTTCGGAGCGGCGCTCGCGAAGGCTCGCTGCTGTCGGTCA TCGATCAAACGATCACTCCTCCCGGCAGCCGATTGCTGGCCGACTGGGTCGGCGCGCCACTGACCAACCTGGCCGCCATC GGCGCGCGGCAAGATGCGGTGGAACTCCTCCGCAACAGCGCCACCGTTCGGCGCCAAATTCGTGAGGAACTGGCGGGCGT TTACGATCTCGAGCGGCTGATTGCGCGGGTGACCACGCTGCGCGCAAGTCCTCGCGATTTGGCGTTTGTCGGACGAACAC TCGCGCGACTGCCGCAGCTCAAAGCGCTCGTTGCCCATCTGCGTGCGCCGCTGCTCGACGATCTGCAAACGCGGCTCGAC GAATCTCCTGCGCTCCGCGATTTGCTGGCCGCTGCGCTCGAGGACGATTGCCCGCTTTTGGCCCGCGATGGGAACTTCAT TCGCCAAGGTTTTCACGGCGAGCTCGATCGCCTGCGCGAGATGGCCCATGGTGGCAAAGCGTGGATCGCGCGCTATCAGG CCGATCAGATCGAAAAGACGGGAATTCCCAATCTGAAGGTCGCCTTCAACAAAGTCTTTGGCTACTACATCGAGATCACC AACGCGCAAAAAGAGAAGACGCCGCCCGAGTATATTCGCAAGCAAACGGTCGCTTCCGCCGAGCGCTACATTACCCCCGA GCTGAAAGAGTACGAAGAAAAAGTCCTCACCGCCGACGAGCGTTCGAAAGAGCTCGAGTATCAGCTGTTTGTAGAGCTGC GCGACAAGACGCATCAATTTGCCCGCGCTTTGCGGATGACAGCGGCGGCGATTGCCGAGCTCGATGTCCTCGCGGCGCTC GCGCAGCTGGCCGATCGTCCCGACTATTGCCGCCCGGTGATGACCGAGGATCAAGTGGTCGAGATCGTTGAAGGTCGGCA CCCGGTGCTCGATGCCATTTTGCCGCGCGGCACGTTTGTGCCGAACGATACCACGCTCGGCACCGACGGAGGACTGGTGA TGCTGATCACCGGTCCGAACATGGCGGGCAAGAGCACCTACATTCGGCAGGTCGCCGTGCTGTCGCTTCTGGCGCACGTG GGGAGTTTTTTACCAGCGTCGCGCGCTACGATTGGAATTTGCGACCGGATTTTCGCCCGCGTTGGCGCAAGCGATGAGCT GTCGCGCGGTCAAAGCACCTTCATGGTCGAGATGACCGAAACCGCGCGGATTTTGAATTCCGCCACAGCGCGCAGCCTCG TGATCCTCGACGAAATTGGGCGTGGCACAAGCACCTACGATGGCATTTCGCTCGCCTGGGCGATCGTCGAACATCTGCAC GATCAGATCGGCTGTCGCACGCTGTTTGCCACGCACTACCACGAACTCACCGACCTGGCTGGCTCGCTCGCTGGCGTCCG CAACCTGAGCGTCGCGGTGCGCGAGTGGCAAGATCAAGTGGTGCTGCTTCACAAGATTGTGCCCGGCGCAGCCGACAAAA GTTATGGCATTCACTGCGCTCGATTGGCCGGTGTTCCGCGGAGCGTGAACGAACGGGCCAAACAGATTCTCGCGAAACTC GAGGGAGAAAATCTCGACACCGAGGGACGGCCGAAGCTGATTGCGCGGACCAAAAAATCGCGCAAGGGAGACCTGCAGCT GACACTGTTTGCCCCGGAAGAGCATCCACTCCTCGAGCAGCTGCGGCAACTCGATTTGGCGGGGCTCACGCCGCTGCAGG CTATGCAGTGGCTTGCCAACTGGCAGCAAGAGATCGGCCCAAAAAAGTAG Protein sequence : MAVTPMMQQYLDAKQACGDALLLFRMGDFYELFHDDARTASRVLGLTLTTRDKGENPVPMAGFPYHQLEGYLAKLIGGGL RAAVCEQVEDPRQAKGLVKREVTRVVTPGTLTDDALLDPRESNYLAAMVLPDTLQPHTPVGLAWADLSTGRFQAAVFPFA RLGDELARLQPSECLLGDDQPPPTCPFPPRMMITRRPEWTFARDTSQAVLQKQLQVASLEGFGFDESDMLAIRAAGGILE YLRETQKTSLDHIDRLLPYRSGESLEIDEATRRSLEITRTFRSGAREGSLLSVIDQTITPPGSRLLADWVGAPLTNLAAI GARQDAVELLRNSATVRRQIREELAGVYDLERLIARVTTLRASPRDLAFVGRTLARLPQLKALVAHLRAPLLDDLQTRLD ESPALRDLLAAALEDDCPLLARDGNFIRQGFHGELDRLREMAHGGKAWIARYQADQIEKTGIPNLKVAFNKVFGYYIEIT NAQKEKTPPEYIRKQTVASAERYITPELKEYEEKVLTADERSKELEYQLFVELRDKTHQFARALRMTAAAIAELDVLAAL AQLADRPDYCRPVMTEDQVVEIVEGRHPVLDAILPRGTFVPNDTTLGTDGGLVMLITGPNMAGKSTYIRQVAVLSLLAHV GSFLPASRATIGICDRIFARVGASDELSRGQSTFMVEMTETARILNSATARSLVILDEIGRGTSTYDGISLAWAIVEHLH DQIGCRTLFATHYHELTDLAGSLAGVRNLSVAVREWQDQVVLLHKIVPGAADKSYGIHCARLAGVPRSVNERAKQILAKL EGENLDTEGRPKLIARTKKSRKGDLQLTLFAPEEHPLLEQLRQLDLAGLTPLQAMQWLANWQQEIGPKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-129 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psta_4270 | YP_003372778.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 5e-140 | 43 |
