Gene Information

Name : Psta_2398 (Psta_2398)
Accession : YP_003370928.1
Strain : Pirellula staleyi DSM 6068
Genome accession: NC_013720
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3131529 - 3133007 bp
Length : 1479 bp
Strand : +
Note : PFAM: aldehyde Dehydrogenase; KEGG: noc:Noc_2605 aldehyde dehydrogenase

DNA sequence :
ATGGCAACGCTGGTTTCTCCGCCCGTACGCAAATTGCCCACCATCCATCAAACCCAATGCTTTATTGGAGGACAGTGGCT
CCCCTCGCAAAGTGGCAAAACGTTCGAGACGATCGACCCCTCGACCGAACAGGTGATTGCTCAGGTGGCCGAGGGGGACG
CCGCCGATGTCGATCTTGCCGCCAAGGCGGCCCGCAAGGCATTCGAAGAGGGGCCGTGGTCGAAAATGGATGCTCGCGAT
CGTGGTCGGCTGATGTACAAGCTGGCCGACCTGATCGAAGAGGAAAAGGAAGAACTGGCCGCCCTCGAGTCGCTCGATAA
CGGCAAGCCGGTGCGAGATTCGCTCGCCGCCGACCTGCCACTCACGATCGACTGTCTTCGCTATTACGCCGGTTTCGCCG
ACAAAATCCATGGCCAAACGATTCCAATCCGAGGCAATTACCTTTGCTACACCCGCAAAGAACCCGTGGGAGTGGTAGGG
CAGATCATTCCTTGGAACTTCCCCATGCTGATGACAGCTTGGAAATGGGGACCCGCCCTCGCCGCCGGTTGCACGATTGT
GATGAAGCCAGCCGAACAGACCCCGCTCACCTGCTTGCGCATGGCTCGACTGGCACAGAAAGCGGGCATTCCCGACGGCG
TGATCAACGTGGTGCCCGGTTATGGACCGACCGCTGGCGCCGCAGTGGTGAAGCATCCGGGAATCGACAAGGTGGCGTTC
ACCGGCGAGACCAGCACCGCGCAAACGATCATGCGCGAATCGGTTGCCTCGCTCAAACGGCTCACGTTCGAGCTGGGTGG
CAAGAGCCCCAACATCATCTTCGCTGATAGCGATCTCGATGCGGCTGCGGCGGGCGCGCACTTTGGGTTGTACTTCAACC
AAGGGCAATGCTGCTGCGCTGGCAGCCGCGTGTTTGTCGAGGACAAAGTGTATGACAAGTTCATCGACAAAGTGGCCTCG
ATGAACACGTCGCGCCGGCTGGGCGATCCGCTTGACCCCACCACCGAGCAAGGTCCGCAGGTCGACAAAACGCAGATGGA
AAAAATCCTGCACTACATCGATCTTGGCAAGCAGCAAGGGGCGCAGATGGTGAGTGGTGGCAAGCGTTTTGGCGAGAAGG
GCTACTACGTCGAGCCGACCCTGTTTGCCGACGTGAACGACGACATGTCGATCGCCAAAGATGAAATTTTTGGCCCGGTG
ATGAGCGTGCTCCGATTCAGCGACATGGACGATCTGCTGAAGCGGGCCAACAACACCATGTTCGGACTTGCCGCCGCCGT
TTGGACACGCGACATCGGCCGAGCGCACACGTTTGCTAAAGCACTTCGAGCTGGCACGGTGTGGGTGAACTGCTACGACG
TCTTCGACGCCGCTGCCCCGTTCGGCGGTTTCAAGATGAGCGGCATCGGCCGCGAACTTGGCGAAGAAGGCCTTAAGGCC
TACACCGAAAACAAAACCATCACCGTCGCCATGAGTTAG

Protein sequence :
MATLVSPPVRKLPTIHQTQCFIGGQWLPSQSGKTFETIDPSTEQVIAQVAEGDAADVDLAAKAARKAFEEGPWSKMDARD
RGRLMYKLADLIEEEKEELAALESLDNGKPVRDSLAADLPLTIDCLRYYAGFADKIHGQTIPIRGNYLCYTRKEPVGVVG
QIIPWNFPMLMTAWKWGPALAAGCTIVMKPAEQTPLTCLRMARLAQKAGIPDGVINVVPGYGPTAGAAVVKHPGIDKVAF
TGETSTAQTIMRESVASLKRLTFELGGKSPNIIFADSDLDAAAAGAHFGLYFNQGQCCCAGSRVFVEDKVYDKFIDKVAS
MNTSRRLGDPLDPTTEQGPQVDKTQMEKILHYIDLGKQQGAQMVSGGKRFGEKGYYVEPTLFADVNDDMSIAKDEIFGPV
MSVLRFSDMDDLLKRANNTMFGLAAAVWTRDIGRAHTFAKALRAGTVWVNCYDVFDAAAPFGGFKMSGIGRELGEEGLKA
YTENKTITVAMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-88 46
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-88 46
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-88 46
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-87 46
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-84 45
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psta_2398 YP_003370928.1 aldehyde dehydrogenase VFG0082 Protein 1e-84 45