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Name : Psta_1838 (Psta_1838) Accession : YP_003370372.1 Strain : Pirellula staleyi DSM 6068 Genome accession: NC_013720 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2330288 - 2333035 bp Length : 2748 bp Strand : + Note : KEGG: pap:PSPA7_0162 type VI secretion ATPase; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase DNA sequence : ATGGCTGAGATTAGTCGCGTAGCCCTTTTTGGAAAACTTAACAGCCTCGCTTATCGCGCGATTGAGGCCGCCACCGTCTT TTGCAAGATGCGTGGCAATCCTTACGTCGAGTTGGCTCACTGGCTGCATCAGATTCTGCAGCTTCCCGATTCTGACGTGC ACAAAATCATTAAGCAGTTCAATCTCGAGCCAAGTCGTTTGGCGCGTGATCTGACCGAAACACTCGATCGTTTTCCACGC GGCAGTTCCAGCATCTCGGACCTTTCGAGCCATCTCGAAGATGCGACTCAGCAAGGCTGGGTCTATGCCACGCTGATGTT CAAGGACTCGCAAGTCCGGACTGGTTACTTGATCGTCGGCATGATCAAAACCAAAACGCTGAACAACGCACTGCTGAGCA TTTCGAAAGAATTTGGCAAAATCAACGCCGATACGTTGATCGACAAGTTTGCTGAAGTGGTGGCAGGCTCGCCCGAAGAT TCGCTCCGCGCCAGCGATGGAACCCAGGTCGGTGGCGGCGCTGTTCCTGGCGAAGCGAGCGGCGCGATGGCTCCCGCTGC GATGGGCAAGCAAGAGGCGCTCAAGCAATTTTCGATCGACCTGACCGAGCGTGCTCGCAAAGGGGAGATCGACCCGATTG TTGGTCGCGACGAAGAGATTCGTCAACTTGTCGACATTCTGATGCGTCGTCGTCAGAACAACCCAATCCTCACCGGTGAA GCAGGTGTGGGTAAAACTGCGGTGGTCGAAGGTTTTGCCCTCCGCATTGCTTCGGGCGATGTTCCTCCGTCGCTGAAAGA TGTTTCGCTTCGCTCGCTCGACATCGGTCTCTTGCAGGCCGGCGCGAGCATGAAGGGCGAGTTCGAAAATCGCCTTCGTC AGGTGATCGAAGAAGTGCAATCGAGCGAACAGCCGATCATTCTGTTTATCGATGAAGCTCATACTCTCATCGGAGCTGGT GGAGCCGCTGGAACTGGCGACGCTGCTAACTTGCTCAAGCCAGCACTGGCTCGCGGAAAGTTGCGCACGGTCGCTGCGAC GACCTGGGCCGAATACAAGAAGCACATCGAAAAAGATCCTGCTCTCACGCGCCGCTTCCAAGTGGTTCAAGTCGGTGAAC CAAGCGAAGACAAAGCGATTTTGATGATGCGAGGCATGGCCTCGACCCTCGAGCAGCACCATCGCGTGCAGATTCTCGAC GAAGCGCTCGAAGCCTCGGTTCGTCTCTCGCATCGCTATATCCCCGCTCGTCAGTTGCCCGATAAGTCGGTCAGCTTGCT CGATACCACGTGTGCTCGCGTGGCGATCAGTCAGCACGCTGTGCCTGCAGAAGTCGAAGATTGCCGCCGCAAGATCGAAG CTCTCGAAGTCGAGCAGGGAATCATCGCCCGCGAAAAAGCTGTCGGTGTAGATACCACCAAACGCGAAAAAGAAGTCGAT TCAAAACTAGCCATCGAGCGTGAGCGTCTGAAGGGGCTTGAGCAGCGCTGGACCGACGAAAAGACGCTGGTCGACGAGAT TCTCGACATTCGCGGCAAGCTCCGCGGTCAAACGGGCAAGGTCGAGGGGACGCATAGCAAACTCGAAAAAGCTGCTGACA AGGCTGCCAAAGAAGCACCACCTGTAGCGGCTCCTACGCCTCCGCTCACCGAAGCCGAACGGGCTCCGCTGCTGGCAAAA CTCACCGAACTGCAAGCCAAGCTCACCGCCCTGCAAGGCGAATCGCCACTGATTCTTCCCACGGTCGACGAGCAAGCGGT CGCTTCGGTCGTGGCCGACTGGACCGGCATTCCGGTCGGTCGAATGGTGAAGAACGAAGTCGAAGCTGTGCTCAAGTTGG CCGAGACCCTCGGTCAGCGCGTGATTGGCCAAGACCATGCGATGAAGATGATTGCTCGCCGCATTCAAACTTCGCGTGCC CAGCTCGAGAATCCAAACAAGCCAATCGGCGTATTCTTGCTCGCCGGCACGTCGGGTGTTGGTAAAACCGAAACCGCTCT CGCTTTGGCCGAAGCTCTTTATGGTGGCGAACAGAACGTCATCACCATCAACATGAGCGAGTTCCAAGAGGCTCATACCG TGAGCACCTTGAAGGGTTCGCCTCCCGGTTACGTGGGCTACGGCGAAGGTGGTATTCTCACCGAAGCCGTCCGCCGCAAA CCTTACAGCGTGGTGCTCCTCGACGAAGTCGAAAAGGCTCACGGCGACGTGCACGAACTCTTCTTCCAAGTCTTCGATAA AGGCTGGATGGAAGATGGCGAAGGACGCGTGATCGATTTCAAGAACACGCTCATCCTGCTGACGTCGAATGCCGGTAGCG ACTTGATCATGAACATGTGCAAAGATCCGGAACTGCTTCCCGATCCTGAGGCCATTGCCAAGTCGCTGCGCGATCCGCTG CTGAAGGTCTTTCCCGCAGCATTGCTCGGCCGCCTCGTGACCATTCCTTACTATCCGCTCAGCGATTCGATGATCGCTGC GATCACTCGTTTGCAGCTGCGTCGCATCGAGAAGCGAATCGGCGTCAATCACAAGGTTCCGTTCACCTACAGCGACGAAG TGCTCAAGCTCATCGTCAGCCGCTGCACGGAACTCGAGAGCGGTGGTCGTATGATCGACTCGATTCTCACCAACACAATG CTCCCCGCGATCAGCGAAGAGATTCTCAAGCGGATGATGGTGGGTAGCGCGGTGAAGAAAATCGAAATCACCGCGAAAGG TAGCGAATTCCACTACAACTTTGATTAG Protein sequence : MAEISRVALFGKLNSLAYRAIEAATVFCKMRGNPYVELAHWLHQILQLPDSDVHKIIKQFNLEPSRLARDLTETLDRFPR GSSSISDLSSHLEDATQQGWVYATLMFKDSQVRTGYLIVGMIKTKTLNNALLSISKEFGKINADTLIDKFAEVVAGSPED SLRASDGTQVGGGAVPGEASGAMAPAAMGKQEALKQFSIDLTERARKGEIDPIVGRDEEIRQLVDILMRRRQNNPILTGE AGVGKTAVVEGFALRIASGDVPPSLKDVSLRSLDIGLLQAGASMKGEFENRLRQVIEEVQSSEQPIILFIDEAHTLIGAG GAAGTGDAANLLKPALARGKLRTVAATTWAEYKKHIEKDPALTRRFQVVQVGEPSEDKAILMMRGMASTLEQHHRVQILD EALEASVRLSHRYIPARQLPDKSVSLLDTTCARVAISQHAVPAEVEDCRRKIEALEVEQGIIAREKAVGVDTTKREKEVD SKLAIERERLKGLEQRWTDEKTLVDEILDIRGKLRGQTGKVEGTHSKLEKAADKAAKEAPPVAAPTPPLTEAERAPLLAK LTELQAKLTALQGESPLILPTVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLAETLGQRVIGQDHAMKMIARRIQTSRA QLENPNKPIGVFLLAGTSGVGKTETALALAEALYGGEQNVITINMSEFQEAHTVSTLKGSPPGYVGYGEGGILTEAVRRK PYSVVLLDEVEKAHGDVHELFFQVFDKGWMEDGEGRVIDFKNTLILLTSNAGSDLIMNMCKDPELLPDPEAIAKSLRDPL LKVFPAALLGRLVTIPYYPLSDSMIAAITRLQLRRIEKRIGVNHKVPFTYSDEVLKLIVSRCTELESGGRMIDSILTNTM LPAISEEILKRMMVGSAVKKIEITAKGSEFHYNFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 50 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-129 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-129 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psta_1838 | YP_003370372.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 74 |
| Psta_1838 | YP_003370372.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 8e-140 | 42 |
