Gene Information

Name : Psta_1600 (Psta_1600)
Accession : YP_003370135.1
Strain : Pirellula staleyi DSM 6068
Genome accession: NC_013720
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2011485 - 2013545 bp
Length : 2061 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: transketolase central region; transketolase domain protein; KEGG: bxe:Bxe_B1309 transketolase

DNA sequence :
ATGGCATCGGCCTCGACTTCGATCAGCGTAGAGCAACTCGCAATCAACACGATCCGCACCCTTTCGATGGACGCGGTGCA
GAAGGCTAATAGTGGTCACCCTGGTACGCCGATGGCCCTAGCGCCGATTGCGTATACCATTTGGCAAAACAACTTGCGCC
TCGACCCAGCCGACCCAAACTGGCCCTGCCGCGATCGTTTCGTTCTGTCGTGCGGTCACGCGTCGATGCTGCTGTACTCG
ATGATCCACCTCGCCGGCCTCAAGAAGGTCGACAAAGCGGGCAAGGTGCACGACGCCCCGTCGATCACTATCGAAGACAT
CCAAAACTTCCGTCAGATCGGCAGCCCTTGTGCTGGCCATCCTGAGTACGGCGATGCTTCGGGAATTGAGACCACGACCG
GCCCGCTCGGACAAGGGATCGCCAACAGCGTCGGCATGGCGATGGCCGCCAAATGGTTTGGCGCTCGCTACAACCGCCCT
GGCTTTGAGCTGTTCGAGAATCGTGTGTATGTGCTCTGCAGCGACGGCGACGTGATGGAAGGTGTCGGCTGCGAAGCAGC
TTCGGTCGCCGGTCACCTGGGTCTTGATAACCTGATCTGGATCTACGACGACAACAACATCACCATTGAAGGCGAAACCG
AACTTGCTTTCAGCGAAAATGCTGCCAAGCGTTTCGAAGGACTCGGCTGGAACACTCTGACGGTCACCGACGCCAACGAT
GTCGCGGCATTACAGGCAGCGATTGACGAATTCAAAAACACCACCGGCAAACCAACCCTGGTGATCCTCAAGAGCGTGAT
CGGCTGGGGTTCGCCGAACAAAGCGAACACCCACAACGCCCACGGTGCTCCGCTCGGCGAAGAAGAAATCAAACTCACCA
AAGCGGTTTACGGCTGGCCGGTCGACGCCAAGTTCCTGGTGCCTGAGGAAGTGAAGCAGCACTTCGCCGATGGCATCGGT
AAGCGCGGCAGCGAAGCTCGCGAGAATTGGGCCAAACAGTTTGCCGCTTACGAAAACGCTTTCCCCACCGAAGCCGCTCA
GCTGAAAGAAATCTGGGCCGGCAAATTACCAACGGGTTGGGATTCGGCGATTCCTACGTTTCCAGCCGACGCCAAGGGAC
TCGCTTCGCGCGTATCGTCGGGCAAAGTAATCAACGCCATCGCCAAGAACTTCCCGTGGATGATCGGTGGATCGGCTGAC
CTTGCTCCGTCGACGATGACGATGCTCGAATTCGAAGGTGCGGGGCATTTCTCGGCTCACGACTACGGAGGACGCAACCT
CCACTTTGGTATTCGCGAGCACGCGATGGCTGCGATTTGCAATGGCCTTTCGCTCAGCGGGCTCCGTCCGTACTGCGCGA
CGTTCTTCGTCTTCACCGACTACATGCGTCCCTCGATGCGACTCTCGTCGATCATGCATCGCCCGGTAACTTATGTCCTC
ACGCACGACTCGATTGGCCTGGGCGAAGATGGCCCCACGCATCAGCCTGTCGAGCACTTGGCTGCTTGCCGCGCGATTCC
TGGCCTCGACGTTTGCCGCCCCGGCGATGCCAACGAAGTGGCTGAAGCTTATCGCGCCGCGATGACTCGCCAAACGCACC
CGATTGCGATGGTCCTCTCGCGCCAGAACTTGCCGACCATCGATCGCACCAAGTTCGGCGCTGCAGCACTCACCGCCAAG
GGTGGCTATATCTTGGCCGATGCTGCCGGTGGCAAACCAACCGCTATCATCATGGCCACAGGAAGCGAGCTCGACATCGC
GATGAAAGCCTACGAAGCACTCACCGCTGAAGGTGTGGCGGTTCGCCTGGTAAGCATGCCTTGCCAAGAGTGGTTCGACG
AACAGTCGGCTGAGTATCGCGAATCGGTACTCCCCACTTCGGTGACCGCACGTGTCGCTGTTGAAGCGGGCATTCGTATG
GGCTGGGACAAGTACCTCGGCTCGCGCGGCGAGTTTGTCGGTATGAGCAGCTTTGGTGCGAGTGGTCCCTTCAACCAGCT
CTACAAAAAGTTTGGCATCACCAGCGAGAACGTCGCCGCCAAGGTGAAGTCGCTGCTCTAA

Protein sequence :
MASASTSISVEQLAINTIRTLSMDAVQKANSGHPGTPMALAPIAYTIWQNNLRLDPADPNWPCRDRFVLSCGHASMLLYS
MIHLAGLKKVDKAGKVHDAPSITIEDIQNFRQIGSPCAGHPEYGDASGIETTTGPLGQGIANSVGMAMAAKWFGARYNRP
GFELFENRVYVLCSDGDVMEGVGCEAASVAGHLGLDNLIWIYDDNNITIEGETELAFSENAAKRFEGLGWNTLTVTDAND
VAALQAAIDEFKNTTGKPTLVILKSVIGWGSPNKANTHNAHGAPLGEEEIKLTKAVYGWPVDAKFLVPEEVKQHFADGIG
KRGSEARENWAKQFAAYENAFPTEAAQLKEIWAGKLPTGWDSAIPTFPADAKGLASRVSSGKVINAIAKNFPWMIGGSAD
LAPSTMTMLEFEGAGHFSAHDYGGRNLHFGIREHAMAAICNGLSLSGLRPYCATFFVFTDYMRPSMRLSSIMHRPVTYVL
THDSIGLGEDGPTHQPVEHLAACRAIPGLDVCRPGDANEVAEAYRAAMTRQTHPIAMVLSRQNLPTIDRTKFGAAALTAK
GGYILADAAGGKPTAIIMATGSELDIAMKAYEALTAEGVAVRLVSMPCQEWFDEQSAEYRESVLPTSVTARVAVEAGIRM
GWDKYLGSRGEFVGMSSFGASGPFNQLYKKFGITSENVAAKVKSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-134 47
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-127 44