Gene Information

Name : Psta_1479 (Psta_1479)
Accession : YP_003370014.1
Strain : Pirellula staleyi DSM 6068
Genome accession: NC_013720
Putative virulence/resistance : Resistance
Product : D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 1868353 - 1869348 bp
Length : 996 bp
Strand : -
Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: maq:Maqu_3853 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding

DNA sequence : 
ATGCGAACCGCCGTGTTTAGTACGCATGCCTATGATCGCGAATTCCTCGAGCCAGCGGCTCAAAAAACAGGGCACGAACT
GGTCTTTTTCGAAGCCCGACTGACACCGCAAACGGTGCCGCTTGCTGCAGGATTTCCGGCCATTTGTTCGTTTGTGAACG
ACTCGCTGAGCCGCGAAATCCTCACCACACTCGCCGCCGGCGGAACCAAATTCATCGCCCTCCGCTGTGCCGGTTTTAAC
CAGGTCGATCTCGCCGCTGCTGCCGAGCTAGAAATCCGCGTCGCCCGGGTCCCTGCCTACTCCCCTTATAGCGTTGCCGA
GCACACCGTGGCCCTCATGCTGGCCCTCAATCGGAAGCTACATCGTGCGTACACCCGCGTTCGCGACAGCAATTTCGCCC
TCGATGGACTCCTCGGGTTCGATTTCCACGGCCGCACGGTGGGGGTGATCGGAACCGGTAAAATCGGGCTCTGCACCGCG
AAAATCCTGGCCGGATTTGGCTGCGAACTCCTCTTTTACGACGTCTATCAGAACCCCGAAGCCGCGACACTTGGTCGCTA
CGTCCCGCTCGAGCAACTCCTAACCGCCAGCGACATCATCACCCTCCACTGCCCGCTCACCCCCGACACCTACCACCTGA
TCGGCGACGCAACCCTGGCGAAAATGAAGCCGGGCGTGATGATTGTGAACACCAGCCGGGGTGCCCTGGTCGATACGCGG
GCCGCTATCGAGGCACTTAAGTCGGGACAAATTGGCTACTTAGGGCTCGACGTCTACGAAGAAGAGGCCGACCTCTTTTT
CCGCGACCTCTCAGGCGTAGTCATTCAAGACGACCAGTTCAGCCGACTGCTGACCTTCCCCAATGTCCTGGTGACCGCCC
ATCAGGCCTTCTTCACCCGCAACGCCCTGACCGAGATCGCCCGCGTCACCATGGCCAACCTGACGGCAGCCGAGCAGGGC
GAAACCCTCGTCAACGAGGTGATGGTCCCCCGATAA

Protein sequence : 
MRTAVFSTHAYDREFLEPAAQKTGHELVFFEARLTPQTVPLAAGFPAICSFVNDSLSREILTTLAAGGTKFIALRCAGFN
QVDLAAAAELEIRVARVPAYSPYSVAEHTVALMLALNRKLHRAYTRVRDSNFALDGLLGFDFHGRTVGVIGTGKIGLCTA
KILAGFGCELLFYDVYQNPEAATLGRYVPLEQLLTASDIITLHCPLTPDTYHLIGDATLAKMKPGVMIVNTSRGALVDTR
AAIEALKSGQIGYLGLDVYEEEADLFFRDLSGVVIQDDQFSRLLTFPNVLVTAHQAFFTRNALTEIARVTMANLTAAEQG
ETLVNEVMVPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psta_1479 YP_003370014.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein AF155139.2.orf4.gene Protein 7e-38 42
Psta_1479 YP_003370014.1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein U35369.1.gene5.p01 Protein 2e-38 41