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Name : ROD_p1301 (ROD_p1301) Accession : YP_003368471.1 Strain : Genome accession: NC_013717 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 27957 - 30536 bp Length : 2580 bp Strand : + Note : - DNA sequence : ATGAACAGAACAAATTATTCAACTCTGCTGGCCGCCACTTTCCTTTTTCACCAGTGTGTGGATGCGAAGGAGCTCTGGTT TCCACCTGAACTGATTAGTGCGGATAGTGATATAAGTGATTTGTCCCGTTTTGCCAGAGGAGAGCAGTTGCCTGGTATTT ATAAAGTATCAGTATTTATCAATCAGGAGCCTCAGGGGATCCGCAACCTGAACTTTATTGTTGCAGATACAAATGAGAAA CGGGCTGGTATTACAGATAATACTGGATTAATGGCTGCTCTGACCCGTAATGACCTGCTTGAAATGGGGGTGCGAGATGA GGCTTTCAGGGATATACCTTTAGACGGAAAAAATAGTGATGCCGGTAAATTTATTTCTCCGGGCAGTGTAATTTCACATG CCACCACAAACTTCAATTTTCAGCTAATGCGTCTGGATATAAACATCCCTCAGAAATGGATAAAGAAACGTCCACGCAAC TGGATCCCCCCTGAGCGTTGGGACGATGGCATAACTGCCGGATTGCTGAACTATGCGTTTAGCGGCACAAACAGTCAGGG ACGCTACAGGAATAGCCAGAGCTATTACCTGCGTCTGAACAGTGGAATTAACGTCGGTCCCTGGCGATTGAGGGACGAAC ATATGATGAATGATTATCATTATGGCACATCCCGGCACCGGGAGTGGTACCATGTGCGTACCTGGCTTGAACGTGGAATT TCAGCATGGCGTAGCAGTCTGGTTGTGGGGGATACCACTACAGATGGTCGTTTATTTGAGTCTTTTGGCATCCGTGGTCT CAGCCTTAAGACAGACGATGGCATGTATCCTGAAGTCGAACGAGGCTATGCGCCAGTTGTTCGGGGTACAGCAATGAGTA ATGCCCGTATCAGCATTCGTCAGAATGGATATGTAATCTATGAAACCAATGTGGCACCGGGTGAATTCGTGATCGATGAT ATTGACCCGATGTACTCCAGTGGCGACCTGAATGTCACCGTCACTGAGGCGGATGGTGCTGTCCGTATCTTCACGGTACC GTACTCCACCCTGCCGATGTTACTGAGAGAGGGGAGTGTTCACTATACCCTGAACGCAGGGAGACTGAATGAGAACAGAG GGAGTGACGGCCAACAACCGACCTTAGTTCAGGGGACTCTGTCATGGGGGTTACCTCACGGGATAACCACATATGGCGGT ATTCAGTATACGCGAAAATATCGTTCTGTAGCATTAGGTGCAGGTATCAATATGGGGAGCTGGGGAGCATTATCTGCGGA TGTCACACATGCGGATAGTCAGATCGCTGATGGTAGTCGCCATAACGGTCAGTCTGTACGCTTCCTGTACAGCCGTGATT TTGAAACTACAGGAACCACTTTCCAGTTGGCTGGTTACCGCTACTCTACCAGTGGTTTTTTCACTCTTGAGGAGAATAAC CGTTTACATATGAGTGGCTGGCATAATGAACAGCAATATGACGCCAGCGGTCGCTTGATTCCCCGCAAAGCAACCGACTG GTATGACATGAAAGATAACCGCCGGGAACGAATAGATGTGAACATCTCCCAGCGTCTGGGAAACGACAGTTCACTGTATC TGATTGGTAGCCGCCAGTCATACTGGAGTACTTCGAGAGCAAGCTCATCCTTACAGGGGGGGTTCAGCAGTACATTGGGG GCTATCAACTACAGCCTGAGCTATAGTGAAAACTACAATCCATCTCCACACCACCACCATACGGAGAGGGAAATAAGTCT TTCATTATCTATCCCAATGGAAAGTTTGTTCTCAGGCGCAGGAAAGTCCATGTACGCCTCCGTTAGTGCTGCGCGTAACA ATAACGGGGAAATGAGTCAGCAAATGTCGCTGAGTGGCAGTGCTCTGGAGCAGAACAATCTGAACTGGAACCTGTCTCAG GGATATTCCCGCCAGGGCGGAAGCACTGGTAATGGCAGTCTGGCTTATCGTGGAGCATATGGCGATATCTCTGCCGGTTA CAGCCAGGGGCGTGACTACAGACAGCTCAGTTATAACCTGGAAGGCGGCATAGTGCTACACCGTGGTGGCCTGACCCTTG GTCAGCCGTTGGGGACAACCAGTATCCTGGTGGCGCTGCCTGGTTCTTCAGGTGTACCACTGGAGCACAGTAACGGCGTA AAGACTGACTGGAACGGCTATGCTCTTCAGCCCTGGGCTACAGAGTACCAGGAAAATCGCGTGGCGCTGGATGTAACTCG TCTGGATCCCCGGACAGAAGTTGAGAAACCAGTTATCCATGTCGTGCCATCTAAAGGTGCAATCGTACGTGCAGAATTCT CTGCCAAAACCGGATTACGGGTCCTGATGACATTAATGAAGGATGGTAAACCGTTACCGTTCGGGACGATTGTGACCTCA GAAAACAGCAGCGGTATTGTCGGGGACAATGGGCTGGTCTATCTGACCGGTCTTAATAATACAGGAACGCTGACTGCAAA ATGGGGAAATGGTGCTGCCCGGTCCTGTAAAACCACCTGGAATTTCATCGACTCCGGAAGCACAACATCTCCGCTCAGAG TGACAGCCGTCTGTCAGTAG Protein sequence : MNRTNYSTLLAATFLFHQCVDAKELWFPPELISADSDISDLSRFARGEQLPGIYKVSVFINQEPQGIRNLNFIVADTNEK RAGITDNTGLMAALTRNDLLEMGVRDEAFRDIPLDGKNSDAGKFISPGSVISHATTNFNFQLMRLDINIPQKWIKKRPRN WIPPERWDDGITAGLLNYAFSGTNSQGRYRNSQSYYLRLNSGINVGPWRLRDEHMMNDYHYGTSRHREWYHVRTWLERGI SAWRSSLVVGDTTTDGRLFESFGIRGLSLKTDDGMYPEVERGYAPVVRGTAMSNARISIRQNGYVIYETNVAPGEFVIDD IDPMYSSGDLNVTVTEADGAVRIFTVPYSTLPMLLREGSVHYTLNAGRLNENRGSDGQQPTLVQGTLSWGLPHGITTYGG IQYTRKYRSVALGAGINMGSWGALSADVTHADSQIADGSRHNGQSVRFLYSRDFETTGTTFQLAGYRYSTSGFFTLEENN RLHMSGWHNEQQYDASGRLIPRKATDWYDMKDNRRERIDVNISQRLGNDSSLYLIGSRQSYWSTSRASSSLQGGFSSTLG AINYSLSYSENYNPSPHHHHTEREISLSLSIPMESLFSGAGKSMYASVSAARNNNGEMSQQMSLSGSALEQNNLNWNLSQ GYSRQGGSTGNGSLAYRGAYGDISAGYSQGRDYRQLSYNLEGGIVLHRGGLTLGQPLGTTSILVALPGSSGVPLEHSNGV KTDWNGYALQPWATEYQENRVALDVTRLDPRTEVEKPVIHVVPSKGAIVRAEFSAKTGLRVLMTLMKDGKPLPFGTIVTS ENSSGIVGDNGLVYLTGLNNTGTLTAKWGNGAARSCKTTWNFIDSGSTTSPLRVTAVCQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 1e-140 | 41 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 5e-138 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_p1301 | YP_003368471.1 | fimbrial outer membrane usher protein | VFG0446 | Protein | 1e-131 | 42 |
| ROD_p1301 | YP_003368471.1 | fimbrial outer membrane usher protein | VFG0876 | Protein | 6e-144 | 41 |
| ROD_p1301 | YP_003368471.1 | fimbrial outer membrane usher protein | VFG1645 | Protein | 3e-138 | 41 |
| ROD_p1301 | YP_003368471.1 | fimbrial outer membrane usher protein | VFG0912 | Protein | 9e-139 | 41 |
