|
Name : ROD_07431 (ROD_07431) Accession : YP_003364367.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : tonb dependent receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4773 EC number : - Position : 816700 - 818868 bp Length : 2169 bp Strand : + Note : - DNA sequence : ATGAATAAATTCCCCCCTCGGGCAAGGCTATTGTCCATTCTGATTGCCGTTGCGACGCACAGTGTACACGCTGCCAGTTT CTCAGAAGAGAATATCATTGTTACCCCTCAGACGCCGGAGAATACCGCCCAGGCCAGTTCAGGCGCAGGTTTCAAAACTG ACGATATTGAGATGGGCCCTCTGGGCAATAAAACCTGGGTTGATACGCCCTTTTCCACGACTACCGTTACTCATGAAATG ATTAGTAACCAACGGGCGCAAAGCGTAAGTGAATTACTCAAATATTCACCGAGTACGCAAATGCAGGCGCGCGGCGGAAT GGATGTTGGCAGGCCGCAAAGTCGTGGTATGCAGGGTAGCGTCGTGGCAAACAGTCGTCTTGATGGTCTGAATATTGTTT CAACCACCGCTTTCCCGGTTGAGATGCTGGAACGACTGGATATTCTCAACAGTCTGACCGGCGCGCTGTACGGTCCGGCC AGTCCAGCGGGGCAGTTCAATTTTGTCGCGAAACGCCCCACGGAACAGACGTTGCGGGAGGTGACGATGGGTTATCAGAG CCGTAGCGCGTTTAACGGGCATGTCGATCTGGGCGGGCATTTTGATGATGAGCATCGCTTTGGCTACCGCCTGAACCTGG CAGACCAGGAGGGGGAAGGCAATCTTGCTGACAGCACGCTGCGTCGCAAACTTCTTTCCGTCGCGCTGGACTGGAATCTC CAGCCCGGTACGCAACTTCAACTGGATGCCAGCCATTATGAGTTCATTCAGAAAGGTTATCCGGGGAGTTTTAGCTATGG TCCTGACGTTAAGCTGCCCTCCGCGCCGGATCCGAAAAACAGTCATCTTGCGCTCAGCACCGCCGGTAACGATTTAACCA CCGACACGATCAGTACACGGCTGATTCATTATCTCAACGATGACTGGACGCTGACGGCCGGGGTCGGCTGGCAGCAGGCG GACCGGGCGATGCGCAGCGTCAGCAGTAAAATCATCAACAGCCAGGGCGATATTAGCCGTTCAATGAAAGATTCTACCGC GGCTGGACGCTTTCGCGTGCTGAGTAATACGGTTACGCTGAACGGCCATGTGGATACTGGCTCAATTGGTCACGATATCG CACTTTCCACCACTGGCTATATCTGGTCTCTGTACAGCGCGAAGGGCTCCGGCACATCCTACCGTTGGGATACGACCAAT ATGTATCACCCCTCCGCGCTGTACGAACAGGGTGATGGAAAAATCAGTACTGGCGGCGCGCGGTATAAATCCAGCGTCAA TACGCAACAGAGTATCACCCTCGGCGACACCCTCACACTGACGCCGAAATGGTCTGCGATGTTCTTCCTTAGCCAGAGCT GGCTTCAGTCACAGAATTTCGACAAAAGTGGTCATCAAAGCAGCCAGATTGATGAGAATGGGCTGAGTCCCAACGCGGCG CTGATGTATAAGATCACGCCAGACGTGATGGCTTATGTCAGCTATGCGGAATCGCTGGAGCAGGGCGGAACCGCGCCAAC CGACAGCGATGTGAAAAATGCCGGGCAGACGCTCGATCCCTACCGCAGTAAGCAATATGAAGTCGGACTGAAAGCGGATG CGGCCGGAATGAATCTGGGAGCGGCGTTATTTCGCCTGGAACGCCCGTTTGCGTATGTCGATCCTGACGATAACACCTAC AAAGAGCAGGGGAATCAGGTCAACCACGGGCTGGAGTTCACGGCAACCGGTCAGGTGGTGCAGGGGCTGAATATCTTCAG TGGAATCACTTTGCTCGATCCGAAACTGAAAGACACCGCCAGCGCTGCCACCCGCAACAAGCAGGTTGTCGGAGTGCCGA AAATACAGGCTAACCTGCTGGCTGAGTATAGCCTGCCGTCGATGCCGCAATGGGTGTACAGCGCAAACGTGCATTATACC GGGAAACGCGCGGCGAATGACACGAATACCGCCTGGGCAGGTAGTTACACCACATGGGATTTAGGCACGCGTTATACCAC CAAAATCAGTCAGGTACCGACAACCTTTCGCGTAGTGGTTAACAACGTTTTCGATAAGCATTACTGGGCATCTATTTTCC CGTCTGGAACAGATGGCGACAATGGTTCGCCGAGCGCTTTTTTAGGTAGCGGACGCGAAATACGCGCCTCTGTCACGTTC GATTTCTAA Protein sequence : MNKFPPRARLLSILIAVATHSVHAASFSEENIIVTPQTPENTAQASSGAGFKTDDIEMGPLGNKTWVDTPFSTTTVTHEM ISNQRAQSVSELLKYSPSTQMQARGGMDVGRPQSRGMQGSVVANSRLDGLNIVSTTAFPVEMLERLDILNSLTGALYGPA SPAGQFNFVAKRPTEQTLREVTMGYQSRSAFNGHVDLGGHFDDEHRFGYRLNLADQEGEGNLADSTLRRKLLSVALDWNL QPGTQLQLDASHYEFIQKGYPGSFSYGPDVKLPSAPDPKNSHLALSTAGNDLTTDTISTRLIHYLNDDWTLTAGVGWQQA DRAMRSVSSKIINSQGDISRSMKDSTAAGRFRVLSNTVTLNGHVDTGSIGHDIALSTTGYIWSLYSAKGSGTSYRWDTTN MYHPSALYEQGDGKISTGGARYKSSVNTQQSITLGDTLTLTPKWSAMFFLSQSWLQSQNFDKSGHQSSQIDENGLSPNAA LMYKITPDVMAYVSYAESLEQGGTAPTDSDVKNAGQTLDPYRSKQYEVGLKADAAGMNLGAALFRLERPFAYVDPDDNTY KEQGNQVNHGLEFTATGQVVQGLNIFSGITLLDPKLKDTASAATRNKQVVGVPKIQANLLAEYSLPSMPQWVYSANVHYT GKRAANDTNTAWAGSYTTWDLGTRYTTKISQVPTTFRVVVNNVFDKHYWASIFPSGTDGDNGSPSAFLGSGREIRASVTF DF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67366.1 | truncated ferric siderophore receptor | Not tested | PAI II CFT073 | Protein | 0.0 | 80 |
