|
Name : ROD_07081 (ROD_07081) Accession : YP_003364332.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG5464 EC number : - Position : 779553 - 780494 bp Length : 942 bp Strand : + Note : - DNA sequence : ATGATGATATCCACAACCTCCTCCCCGCATGATGCGGTGTTCAAACATTTTCTTAGCTTTCCTGAGACTGCGCGGGATTT TCTCGATATTCATCTGCCCGCAACGCTACGGGAAATATGCGATCTGGACACGCTGAAGCTGGAGTCGGGCAGCTTCATTG AAGAGAACCTGCGTTCACGCTATTCCGATGTGCTCTGGTCGCTCAAAACCGAGGACGGTGACGGTTATATCTATGTCGTT ATTGAACACCAGAGCACGGAGGATGCGCATATGGCGTTCCGGCTGATGCGCTATGCCATGGCGGCGATGCAAAGACACCT GGACGCGGGGCATAAAATGCTGCCGCTGGTGATCCCGATGCTGTTTTATCACGGCGCCCGCAGCCCCTATCCGTGGTCGC TTTGCTGGCTGGATGAATTTGCCGATCCGGCAACGGCCCGCGAGCTTTACGCCTCTGCCTTCCCGCTGGTTGATATTACG GTGGTGCCGGATGATGAAATTATGCAGCACCGGCGCATCGCGCTGCTGGAGCTGATGCAAAAACATATTCGCCAGCGCGA TCTGATGGGACTGATTGAGCAGCTCACCGCCGTTTTACTTACGGGTTACGCTAATGACACACAGCTGCAGGTGATGTTTA ATTACATTTTGCAGTCCGGTGATGACCAGCGCTTTAACGATTTTGTGCGTGAAATCACGCAGCGGCTCCCACAACATAAG GAGAGGTTGATGACTATTGCGGAAAGATTACGCCTGGAGGGGCATAGCCAGGGGCTACAGGAAGGTTTATTGCAGGGACG TCAGCAGGGAAAAGAAGAAGGAGAGCGGGAGGCGGCGCTACGCATTGCCCGAGCCATGCTGGCGCAGGGAAGTGAGCGTA GCTGGGTGCTACTGGTAACCGGTCTTAACGAAGACGATCTGGTCGCGGCGCCCGGCCACTAA Protein sequence : MMISTTSSPHDAVFKHFLSFPETARDFLDIHLPATLREICDLDTLKLESGSFIEENLRSRYSDVLWSLKTEDGDGYIYVV IEHQSTEDAHMAFRLMRYAMAAMQRHLDAGHKMLPLVIPMLFYHGARSPYPWSLCWLDEFADPATARELYASAFPLVDIT VVPDDEIMQHRRIALLELMQKHIRQRDLMGLIEQLTAVLLTGYANDTQLQVMFNYILQSGDDQRFNDFVREITQRLPQHK ERLMTIAERLRLEGHSQGLQEGLLQGRQQGKEEGEREAALRIARAMLAQGSERSWVLLVTGLNEDDLVAAPGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3726 | YP_001402680.1 | transposase | Not tested | YAPI | Protein | 2e-85 | 58 |
| pilW | CAF28495.1 | putative transposase | Not tested | YAPI | Protein | 2e-84 | 58 |
| YE3497 | YP_001007658.1 | putative transposase | Not tested | YAPI | Protein | 7e-82 | 56 |
| tnp | AAN64216.1 | transposase | Not tested | necrotizing factor locus | Protein | 2e-81 | 56 |
| PMI2627 | YP_002152329.1 | transposase | Not tested | Not named | Protein | 6e-57 | 44 |
