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Name : kdpB (ROD_07031) Accession : YP_003364326.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 772052 - 774100 bp Length : 2049 bp Strand : - Note : - DNA sequence : ATGAGTCGCAAACAACTGGCGCTGTTCGAACCCCCCCTGGTGACTCAGGCGCTGACAGAGGCCGTTAAAAAATTATCTCC CCGCGCCCAGTGGCGCAATCCGGTGATGTTTATCGTCTGGATCGGCAGCCTGTTGACCACGCTGATCGCCCTTGCGATGT TCAGCGGCCTGATGTCCGGCAATGCGTGGTTCAGCGGGGCGATCTGCCTGTGGCTGTGGATCACCGTATTGTTCGCCAAC TTTGCCGAAGCGCTGGCCGAAGGACGCAGTAAAGCGCAGGCTAACAGCCTGAAAGGGGTTAAAAAAAGCGCCTTCGCCCG TAAGCTGTGTGAACCGAAATACGGCGCGCAGGCAGAGCAGGTCCCGGCAGAGGCACTGCGCAAAGGCGATATCGTGCTGG TAGAGGCTGGCGATATTATCCCCTGCGATGGCGAAGTGATTGAAGGCGGCGCGTCGGTGGACGAAAGCGCCATTACCGGC GAGTCTGCGCCGGTGATCCGCGAGTCCGGCGGCGATTTCGCCTCGGTCACCGGCGGAACGCGCATTCTCTCTGACTGGCT GGTGATCGAATGCAGCGTAAACCCCGGTGAAACCTTTCTCGACCGGATGATCGCGATGGTCGAAGGCGCGCAGCGTCGCA AGACGCCGAACGAAATCGCGCTGACCATACTGCTGATTGCGCTGACTATCGTTTTTCTGCTGGCAACGGCGACCCTGTGG CCGTTTTCCGCCTGGGGCGGTCAGGCAGTCAGCATCACCGTGCTGATTGCCCTGCTGGTGTGCCTGATCCCGACCACCAT CGGCGGCCTGCTCTCCGCGATCGGCGTCGCCGGGATGAGCAGAATGCTCGGCGCAAACGTCATCGCCACCAGCGGCCGCG CGGTGGAAGCGGCAGGCGACGTGGACGTGCTGTTACTGGATAAAACCGGCACCATCACCCTTGGCAACCGTCAGGCCTCG GCGTTCCTGCCGGCCAACGGCGTGGATGAAAGAGCGCTGGCCGACGCAGCGCAGCTCGCCTCTTTGGCGGATGAAACGCC GGAAGGCCGCAGTATCGCCATCCTCGCCAGGCAGCGTTTCAACCTCCGCGAGCGCGACGCGCAGTCGCTGCACGCAACGT TCGTACCGTTTACCGCCCAGAGCCGGATGAGCGGGATTAACATCGACAACCGGACAATCCGTAAAGGCTCTGTCGACGCC ATTCGCCGCTATGTGGCGGCCAATGGCGGACAGTTTCCCGAAGATGTCGGGCAAAAAGTGGACAGCGTCGCCCGCAATGG CGCCACGCCGCTCGTGGTAGTGGAAGGCGCGCGGGTGCTGGGGGTGATCGCATTAAAAGATATCGTCAAAGGCGGGATTA AAGAGCGTTTCGCTCAGCTGCGCAAAATGGGGATCAAAACGGTCATGATCACCGGCGATAACCGACTGACGGCGGCGGCC ATCGCTGCGGAAGCGGGCGTGGACGACTTCCTCGCCGAAGCAACGCCAGAAGCCAAGCTGGCGCTGATTCGCCAGTACCA GGCCGAGGGGCGTCTGGTGGCGATGACCGGGGATGGCACCAACGACGCCCCGGCGCTGGCTCAGGCGGACGTCGCGGTGG CGATGAACTCCGGCACCCAGGCGGCTAAAGAAGCGGGCAACATGGTCGATCTCGACTCCAACCCGACCAAGCTTATTGAG GTGGTGCATATCGGCAAACAGATGCTGATGACGCGCGGCTCGCTGACCACCTTCAGTATCGCTAATGACGTGGCGAAGTA CTTCGCGATCATCCCGGCCGCCTTTGCCGCGACCTATCCGCAGTTGAACGCGCTGAACATTATGCGCCTGCATTCGCCGG ATTCCGCTATTCTCAGCGCGGTGATTTTTAATGCGCTGATCATCGTTTTTCTGATCCCGCTGGCGCTGAAAGGCGTGAGC TACAGGCCGCTCTCTGCCTCAGCGATGCTGCGCCGCAACCTGTGGATTTATGGCCTCGGCGGCCTGCTGGCGCCGTTTAT CGGGATTAAAGTGATTGATTTACTGCTGACCCTGTCGGGTCTGGTGTGA Protein sequence : MSRKQLALFEPPLVTQALTEAVKKLSPRAQWRNPVMFIVWIGSLLTTLIALAMFSGLMSGNAWFSGAICLWLWITVLFAN FAEALAEGRSKAQANSLKGVKKSAFARKLCEPKYGAQAEQVPAEALRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW PFSAWGGQAVSITVLIALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQAS AFLPANGVDERALADAAQLASLADETPEGRSIAILARQRFNLRERDAQSLHATFVPFTAQSRMSGINIDNRTIRKGSVDA IRRYVAANGGQFPEDVGQKVDSVARNGATPLVVVEGARVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIE VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFNALIIVFLIPLALKGVS YRPLSASAMLRRNLWIYGLGGLLAPFIGIKVIDLLLTLSGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-175 | 64 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-175 | 64 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-148 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-148 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-148 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 6e-148 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-148 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 8e-148 | 56 |
