Gene Information

Name : kdpE (ROD_07001)
Accession : YP_003364323.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 768116 - 768793 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCCATTCGCCGCTTTCTGCGCAGCGCGCTGGAAGGCGACGGGCTGCG
CGTGTTCGAAGCCGAAACCCTGCAGCGCGGATTGCTGGAGGCGGCGACGCGTAAACCCGATCTCATTATTCTCGATCTCG
GTCTGCCGGACGGCGACGGTATCGATTTTATTCGCGACCTGCGGCAGTGGAGCGCGGTCCCGGTGATTGTGCTTTCCGCC
CGCAGCGAAGAGAGCGACAAAATCGCCGCGCTTGATGCCGGCGCCGATGACTATCTGAGTAAACCCTTTGGCATTGGCGA
GCTACAGGCGCGCCTGCGCGTGGCCCTGCGCCGCCACGCCTCCGCGCCCGCCCCAGAACCGGTTGTGCGCTTTTCCGATG
TGACGATCGATCTTGCCGCGCGTCTGATTCATCGCGGCGAAAAGGAAATCCATCTGACGCCAATAGAGTTTCGTTTGCTG
GCCGTCATGCTCAATAACGCCGGAAAAGTGCTGACGCAACGACAGCTGTTGAATCAGGTCTGGGGGCCGAACGCGGTCGA
GCACAGCCACTATTTGCGTATTTATATGGCCCACCTGCGGCAAAAACTGGAGCAGGATCCTGCGCGCCCGCGGCATTTTA
TTACCGAAACCGGCATTGGCTATCGCTTTATGCCATGA

Protein sequence : 
MTNVLIVEDEQAIRRFLRSALEGDGLRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIDFIRDLRQWSAVPVIVLSA
RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHASAPAPEPVVRFSDVTIDLAARLIHRGEKEIHLTPIEFRLL
AVMLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMAHLRQKLEQDPARPRHFITETGIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 9e-25 43
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 2e-24 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-24 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 2e-24 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-24 42