Gene Information

Name : fepD (ROD_05991)
Accession : YP_003364225.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 660881 - 661885 bp
Length : 1005 bp
Strand : -
Note : -

DNA sequence :
ATGTCATGCTCTGTTTCCGTGACGCGCGCCATTGCCGTGCCCGGATTGTTGTTATTACTGATTGTCGCTACGGCATTAAG
CCTGATTATCGGGGCAAAGCCCCTCCCCACCGCCGTGGTGCTGGACGCGCTGAGCGGCAGCTGTCATAGCGCCGACTGCA
CTATCGTGCTGGACGCGCGTCTGCCGCGCACCCTGGCCGGGCTGCTGGCGGGCGGCGCGTTAGGTCTTGCCGGGGCGCTG
ATGCAAACGCTGACCCGTAACCCGCTGGCCGACCCCGGCCTGCTGGGCGTCAATTCCGGCGCCAGTTTCGCCATCGTGCT
CGGCGCGGCGCTGTTTGGTTTCTCCAGCCCGCAGGAGCAGCTGGCGATGGCCTTCGCCGGGGCGCTGACGGCCTCGCTGA
TCGTGGCGTTTACCGGCAGCCAGGGCGGTGGTCAGCTCAGTCCGGTGCGCCTGACGCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGATTGACCAGCGGCATCGCGCTGCTGAATCCGGACGTCTACGATCAGCTGCGCTTCTGGCAGGCCGGTTC
GCTGGACATCCGCAATCTGCATACCCTCAGGGTGGTCATCGTGCCGGTGCTGATTGCGGGCGCGACGGCATTGATGCTCA
GCCGCGCGCTGAACAGTCTGAGCCTCGGCAGCGACACCGCCACGGCGCTGGGCAGTAAGGTCGCGCGCACGCAGCTTATC
GGCCTGCTGGCGATCACCGTGCTGTGCGGCAGCGCCACGGCAATCGTCGGCCCCATTGCCTTTATCGGCCTGATGATGCC
GCACATGGCGCGCTGGCTGGTCGGCGCCGATCACCGCTGGTCGCTGCCCGTCACGCTGCTGGCCACCCCTGCCCTGCTGC
TGTTCGCCGATATAATCGGACGCCTGATTGTCCCCGGCGAACTGCGCGTGTCGGTGCTGAGCGCCTTTATCGGCGCGCCG
GTATTAATGTTTCTGGTGCGTCGACGTCCGCGGGGTATCGCATGA

Protein sequence :
MSCSVSVTRAIAVPGLLLLLIVATALSLIIGAKPLPTAVVLDALSGSCHSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNSGASFAIVLGAALFGFSSPQEQLAMAFAGALTASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLRVVIVPVLIAGATALMLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLIVPGELRVSVLSAFIGAP
VLMFLVRRRPRGIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-32 47
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-32 47
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-32 47
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_003364225.1 ferric enterobactin transport protein VFG0926 Protein 2e-103 93