Gene Information

Name : fepC (ROD_05971)
Accession : YP_003364223.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 659092 - 659895 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGAATCAGTAGCCCGTTTGCGTGGCGACCAGTTAACGCTGGGTTATGGCAAATATACCGTGGCCGAAAATCTCAG
CGTATCGATCCCGGATGGACATTTCACCGCCATTATCGGCCCCAACGGTTGCGGAAAATCGACGCTGCTGCGCACCCTGA
GTCGTCTGATGACGCCCGCCCACGGCCACGTCTGGCTCGACGGCGAGCACATCCAGCGCTACGCCAGCAAAGAGGTGGCG
CGGCGCATCGGCCTGCTGGCGCAAAACGCCACCACGCCGGGCGATATTACCGTACAGGAACTGGTGGCGCGGGGGCGCTA
TCCGCATCAGCCATTATTCACCCGCTGGCGCAAGGAAGATGAGGAGGCGGTCGCCCGGGCGATGCGCGCCACCGGCATAA
CCCATCTGGCGAACCAGAACGTCGATACGCTCTCCGGCGGGCAGCGCCAGCGCGCGTGGATCGCAATGGTGCTGGCGCAG
GAGACGTCAATTATGCTGCTGGACGAGCCGACCACCTGGCTGGATATCAGCCATCAGATCGATCTGCTGGAGCTGTTGAG
CGAACTGAATCGCGAGAAAGGTTATACCCTTGCAGCGGTGCTGCACGATCTGAATCAGGCCTGCCGTTATGCCACCCATT
TAATTGCCCTACGCGACGGGAAAATTGTCGCCGAAGGCGCGCCGAAAGAGATTGTCAGCGCGGAACTGATTGAACAGATC
TACGGGCTGCGCTGCACGATTATCGCCGATCCGGTAGCGGGGACGCCGCTGGTGGTGCCGCTCGGACGCACGAAGCGGAA
ATAA

Protein sequence : 
MIESVARLRGDQLTLGYGKYTVAENLSVSIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQRYASKEVA
RRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVARAMRATGITHLANQNVDTLSGGQRQRAWIAMVLAQ
ETSIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYATHLIALRDGKIVAEGAPKEIVSAELIEQI
YGLRCTIIADPVAGTPLVVPLGRTKRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-58 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-50 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-57 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-57 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-57 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-57 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-56 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-56 48
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003364223.1 ferric enterobactin transport ATP-binding protein BAC0164 Protein 5e-50 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_003364223.1 ferric enterobactin transport ATP-binding protein VFG0925 Protein 3e-113 93
fepC YP_003364223.1 ferric enterobactin transport ATP-binding protein VFG1042 Protein 5e-50 50