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Name : tktA (ROD_50511) Accession : YP_003368408.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : transketolase 1 Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 5301931 - 5303922 bp Length : 1992 bp Strand : + Note : - DNA sequence : ATGTCCTCACGTAAAGAGCTTGCCAATGCTATTCGTGCGCTGAGCATGGACGCAGTACAGAAAGCCAAATCCGGTCATCC GGGCGCCCCGATGGGTATGGCTGACATTGCCGAAGTCCTGTGGCGTGATTTCCTGAAACATAACCCGAATAACCCCGCCT GGGCCGACCGTGACCGCTTTGTGCTGTCCAACGGCCACGGCTCAATGCTGATTTACAGCCTGCTGCACCTCACCGGCTAT GACCTGCCAGTTGAAGAGCTGAAAAACTTCCGCCAGCTGCACTCGAAAACGCCGGGCCACCCGGAAGTGGGCTACACCGC AGGTGTGGAAACCACCACCGGCCCGCTGGGTCAGGGCATTGCCAACGCCGTAGGTATGGCGGTTGCGGAGAAAACGCTGG CGGCGCAGTTCAACCGTCCGGGCCACGACATCGTTGACCACTTCACTTACGCCTTCCTGGGCGACGGCTGCATGATGGAA GGCATCTCCCACGAGGCGTGCTCCCTGGCCGGAACCCTGAAGCTGGGCAAACTGATTGCGTTCTACGATGACAACGGTAT CTCCATCGACGGTCATGTTGAAGGCTGGTTCACCGACGACACCGCGAAGCGCTTCGAAGCCTACGGCTGGCACGTGGTGC GCGGCGTTGACGGTCACGATGCTGACGCGATTAAACGCGCGGTGGAAGAAGCACGTGCGGTCACCGACAAACCGTCCCTG CTGATGTGCAAAACCATCATCGGCTTCGGTTCGCCGAACAAGGCGGGCACCCACGATTCTCACGGCGCGCCGCTGGGCGA TGCGGAAATCGCGCTGACCCGCGAAGCGCTCGGCTGGAAGCACCCGGCGTTTGAAATTCCGTCGGAAATCTATGCGCAGT GGGATGCGAAGGAAGCGGGCCAGGCGAAGGAGTCCGCGTGGAATGAGAAGTTCGCCGCTTACGCGAAGGCCTTCCCGCAG GAAGCCGCCGAGTTCACCCGCCGGATGAAGGGCGAGATGCCGTCTGACTTCGACGCGAAAGCGAATGAATTTATCGCGAA GCTGCAGGCGAACCCGGCGAAAATCGCCAGCCGTAAGGCCTCTCAGAATGCGATTGAAGCGTTCGGCCCGCTGCTGCCGG AGTTCCTCGGCGGCTCCGCAGACCTGGCGCCGTCAAACCTGACCCTGTGGTCCGGTTCGAAAGCGATTAACGAGGAGAGC GCCGGTAACTATATCCACTACGGCGTGCGTGAATTCGGGATGACCGCGATTGCCAACGGTATTGCGCTGCACGGCGGCTT CCTGCCGTACACCTCCACCTTCCTGATGTTCGTGGAATATGCGCGTAACGCGGTGCGCATGGCGGCGCTGATGAAACAGC GTCAGGTGATGGTCTACACCCACGACTCCATCGGTCTGGGCGAGGACGGCCCGACGCACCAGCCGGTGGAGCAGGTGGCC TCGCTGCGCGTGACGCCGAACATGAGCACATGGCGTCCGTGCGACCAGGTGGAATCCGCGGTGGCGTGGAAGTACGGCGT GGAGCGTCAGGACGGCCCGACGGCGCTGATCCTGTCGCGTCAGAACCTGGCGCAGCAGGAGCGTACGCCGGAGCAGCTGG CGAACATCGCGCGCGGCGGCTACGTGCTGAAAGATTGCGCCGGTCAGCCGGAACTGATCTTCATTGCCACCGGTTCTGAA GTTGAGCTGGCCGTTGCTGCCTGGGATCAGCTGGCAGGCGAAGGCGTGAAAGCGCGGGTGGTTTCCATGCCGTCCACCGA CGCGTTCGACAGACAGGATGCCGCTTACCGTGAATCCGTGCTGCCAAAAGCGGTGAGCGCGCGTGTGGCAGTGGAAGCGG GTATCGCCGACTACTGGTACAAGTACGTGGGCCTGAACGGGGCGATAGTCGGCATGACCACCTTTGGTGAGTCGGCGCCG GCGGAGCAGCTGTTCGAAGCGTTCGGCTTCACCGTTGACAACGTGGTCGCGAAAGCGAAAGCGCTGCTGTAA Protein sequence : MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPNNPAWADRDRFVLSNGHGSMLIYSLLHLTGY DLPVEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAVAEKTLAAQFNRPGHDIVDHFTYAFLGDGCMME GISHEACSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAKRFEAYGWHVVRGVDGHDADAIKRAVEEARAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREALGWKHPAFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAFPQ EAAEFTRRMKGEMPSDFDAKANEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEES AGNYIHYGVREFGMTAIANGIALHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTPEQLANIARGGYVLKDCAGQPELIFIATGSE VELAVAAWDQLAGEGVKARVVSMPSTDAFDRQDAAYRESVLPKAVSARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAP AEQLFEAFGFTVDNVVAKAKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 82 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 69 |
