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Name : ROD_50011 (ROD_50011) Accession : YP_003368364.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : R : General function prediction only COG ID : COG3972 EC number : - Position : 5253209 - 5255023 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGATTTTACTGGAGCATGAGTATGTTATGGCGAAACTGATAAATGTATCGGCGTCCACTGAGGAGAGAATGACGCCCGG GGAGAGGAGGGTGGCTTCACGACTGGAGAGCTTTCTGAATGATGATTGCCTTGTCTGGTACGATATTCCGGTGGGACGGA AAAACCGACATCCGGATTTTGTCATTATTGACCCGGATAACGGGCTGGTATTTCTGGAGGTCAAGGACTGGACTGTATCC ACATTACGTAAAGCAAATCAGGAGCAGGTTACACTGGAAACCGACGGTCTTCTGAAATCAGAAATAAATCCGCTGGTACA GGTTCGTCGTTATGCCTGTGATACGGTTAATGCCTTACCTGCTGACCCGTGCTTACGGCAGAATGACGGTCAGTATAAGG GTCGGCTGAACCTGGCCTGGGCGTATGGTGTGGTGTTTACCCGCATTACCCGTCAGCAACTGAAGGCACTGACAGGGAAT GATGAGAATGCGGTGGAAAAGATTTTTCCTTCAGCACAGACAATCTGTCAGGATGAAATGACGCAGTCTGTTTTACCTGA GGTATTCCGGCAAAAAATTGCCGGGATGTTTACCACGGGGTTCAGAACCCGGGTGACACCCCGGATGAGAGATATTCTGC GCGCCCATCTGTTTCCTGAAGTGACCGTGAAACAGAACTCACAAATCAAAATCATGGATATCCAGCAGGAGATTCTGGCC AGAAATATTGGTGACGGACATCGTGTCATTCATGGTGTGGCCGGTTCCGGAAAAACCATGATTCTTTTGTGCCGTTGCCT TTACCTGGCAGAAACCACGTCCGGAAAGATTCTGGTGTTGTGCTACAACATTACCCTGGCCAGCTATCTGCGGGAATGCA TTGAGGCCAGAGGGCTGAGGTCACGGGTTACGGTATCTCATTTTCACAGCTGGTGCGCCTCAATGGCAAAACGCCACGGT ATTCAGGTGACGGCAGACAGAAAAGAATATCCTGAGAAATGCTTCAGTACACTGGAAGAGGCCGTGAACAGCGGAAAAAT CACCCAAACCGGATATGATGCTGTACTGGTGGATGAAGGGCATGATTTTGACAGTCGCTGGCTGGCCCTGATTGCCCGTC TGTTTGATAACGCATCCCGTTCACTGCTCCTGATGTACGATGATGCCCAGTCCATTTACCGACGGGAGCGGGCCCTGAAC TTTTCTCTGGCCAGTGTGGGGATTCAGGCACAAGGACGCACTTCTGTCCTGCCGGTCAATTATCGTAATCCGAAACGCAT TCTGCACTTTGCTTATGCATTCTCCCGCGAGTATTTTGAAAAACATCAGAACCGTGAAATACCACTCGTTCAGCCACAGG CGGGTGGTGAAGAGGGCACAGAGCCGGAAATCCTGCGTTGTGCTTCTGAACGTGATGAAGCCAGACAGGTTGCAGACTGG CTGGAGAAGCGCCATGCCCTGTGCGGTCACTGGAGTGATATGGCTGTTCTGTGTCCGGCAGAGTTTTCAGTGAAACAACT GAAAGAGGTTATGACACAACGCGGGATACCGTTTGCCACCTGCTTTGACAGTGAAGGTAAGAAGGCGTACTCGCGACGTA AGGATGTGGTGCATTTACTGACATACCAGAGCAGTAAGGGGCTGGAGTTCCCGTATGTGGCGGTTATCAATGCTTCTTTC GTTCCTTCTGGTGTAGCGGATGAGTCTGAAGTAATTCCGGTGCTTTATGTGGCGTTTACCCGGGCAACCCGTGAATTACT GGTGACCTGTTACCGTGAAAACAGTATCAGTCGTCACCTTGAGGATTTTGCATAA Protein sequence : MILLEHEYVMAKLINVSASTEERMTPGERRVASRLESFLNDDCLVWYDIPVGRKNRHPDFVIIDPDNGLVFLEVKDWTVS TLRKANQEQVTLETDGLLKSEINPLVQVRRYACDTVNALPADPCLRQNDGQYKGRLNLAWAYGVVFTRITRQQLKALTGN DENAVEKIFPSAQTICQDEMTQSVLPEVFRQKIAGMFTTGFRTRVTPRMRDILRAHLFPEVTVKQNSQIKIMDIQQEILA RNIGDGHRVIHGVAGSGKTMILLCRCLYLAETTSGKILVLCYNITLASYLRECIEARGLRSRVTVSHFHSWCASMAKRHG IQVTADRKEYPEKCFSTLEEAVNSGKITQTGYDAVLVDEGHDFDSRWLALIARLFDNASRSLLLMYDDAQSIYRRERALN FSLASVGIQAQGRTSVLPVNYRNPKRILHFAYAFSREYFEKHQNREIPLVQPQAGGEEGTEPEILRCASERDEARQVADW LEKRHALCGHWSDMAVLCPAEFSVKQLKEVMTQRGIPFATCFDSEGKKAYSRRKDVVHLLTYQSSKGLEFPYVAVINASF VPSGVADESEVIPVLYVAFTRATRELLVTCYRENSISRHLEDFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 0.0 | 98 |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 0.0 | 96 |
