Gene Information

Name : ROD_49881 (ROD_49881)
Accession : YP_003368352.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5236669 - 5237292 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
ATGTGTACACGAATTGACTATCTGGCGGATAAATACTGCTTTACAGAACGGAACGAATCGCCCCGTCTTCGCCGGCAATG
GCAGGATGTCCTGGATGAGTGCCGGCAGACAGAGGCAGGGCCTGAAGAACGGTTGCGTATTGCACTGCTGAATGTGGATT
ACGTCACCAGTTTTGAACTGCCTTTTCGCTTGTTGCTTACTCGTACACCACAACTGATTGCCGCGCTGCGTGAAGAATGG
GACATCAGCCAGAAAAATGTGATGTTCAACGATAAACGCTTTGGCTGCGTGTACAGCCTGAAGGCCAGTCTTTCTGGTGT
GCCGGATACATACCGGTATCATCTGTCTCACTGTATTCGTCGCGTGGTTGGGAATGAAAGCACATCATCGCCATATCTGC
AGGTTGCCAGGGAAGTGAAAGCGCCCCGTGAACGGCTGAAGTATGCACTGGAGGCGGGTTTACTGGCGACTGCACTGGAC
GGCCTGTTCTGGTTTGGCAGTCAGCGTATTGCGGCTGATGTCCTGAGGCTGAGAAAGGCCGGAATGCCGGTGGTGACTAC
GACCGTGGAGGTGCATGATAACCTGACGGGAACAACCCGCAAAGTACCTGCATACCATCTCTGA

Protein sequence : 
MCTRIDYLADKYCFTERNESPRLRRQWQDVLDECRQTEAGPEERLRIALLNVDYVTSFELPFRLLLTRTPQLIAALREEW
DISQKNVMFNDKRFGCVYSLKASLSGVPDTYRYHLSHCIRRVVGNESTSSPYLQVAREVKAPRERLKYALEAGLLATALD
GLFWFGSQRIAADVLRLRKAGMPVVTTTVEVHDNLTGTTRKVPAYHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1195 NP_286730.1 hypothetical protein Not tested TAI Protein 4e-89 96
Z1635 NP_287138.1 hypothetical protein Not tested TAI Protein 4e-89 96
Z1635 AAQ19121.1 Z1635-like protein Not tested PAI I CL3 Protein 3e-88 95
unnamed ADD91729.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 3e-88 92
unnamed CAD42058.1 hypothetical protein Not tested PAI II 536 Protein 6e-86 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_49881 YP_003368352.1 hypothetical protein VFG1577 Protein 3e-86 90