Gene Information

Name : ROD_49831 (ROD_49831)
Accession : YP_003368348.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5233478 - 5234047 bp
Length : 570 bp
Strand : +
Note : -

DNA sequence : 
ATGACACACGAGTACAACCCCTTCTGGCAACAACGTATCCGTGAGACGGTGCTGCGCGCACTGGATGTTCATCCCCGTCT
GACGGCATTGCGGGTTGACCTGCGTCTCCCGGATGTACCGGCAGCAACTGACGCAGCAGTGATATCCCGCTTCATCAATG
CCCTGAAAGCCCGAATCGATGCTTACCAGAAGCGTAAGCGCCGTGAAGGTAAACGCGTACATCCCACGACACTGCATTAC
GTCTGGGCCCGGGAATTCGGGGTGCTCAGGGGTAAAAAACACTATCACCTGCTGCTGCTGGTCAACCGTGATACCTGGTG
TGGTGCGGGCGATTACCGCGATCCGGGGTCACTGGCCGGGATGATTAAACAGGCGTGGTGCAGTGCCCTGGGGGTGGATG
CCGGATGCTATGCCACACTGGCGAATTTTCCGTCCAGGCCGGTGGTGTGGCTGGAACGCGATGATGATGCTGGTTTACGA
GATATGCTGAACCGTGCTGACTATCTCGCGAAAGAGTATACCAAAGTCAACGGTACCGGTGAGCGTAATTTTGGCTGTAG
CCGGAATTGA

Protein sequence : 
MTHEYNPFWQQRIRETVLRALDVHPRLTALRVDLRLPDVPAATDAAVISRFINALKARIDAYQKRKRREGKRVHPTTLHY
VWAREFGVLRGKKHYHLLLLVNRDTWCGAGDYRDPGSLAGMIKQAWCSALGVDAGCYATLANFPSRPVVWLERDDDAGLR
DMLNRADYLAKEYTKVNGTGERNFGCSRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 6e-76 86
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 4e-72 85
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 2e-74 85
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-74 85
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-73 84
unnamed AAL08464.2 unknown Not tested SRL Protein 1e-72 83
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 6e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_49831 YP_003368348.1 hypothetical protein VFG1055 Protein 6e-73 83
ROD_49831 YP_003368348.1 hypothetical protein VFG1610 Protein 2e-35 41