Gene Information

Name : ROD_49781 (ROD_49781)
Accession : YP_003368343.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5231050 - 5231649 bp
Length : 600 bp
Strand : -
Note : -

DNA sequence : 
TTGCTGCGTGCTAAAGGAGAGAATATTATGCAAAAACTTGAAAACCGGTGTGATCTGCTGCTCACCCAGCATCAGAAATG
GATGGCAAGTGTAACCCGGTTTATTGTCGCTCATGGAATGGGCTCTCCGCATCTTCATGGTTATCATCGCCTGACCCTGG
CCCACTTTTTTCTGCCGGAAAAAGGCACCATCATCTCGGTGGCACCACAGGGACTCTATCAGGTAGTCAACCCGGGAACG
CCACCGTTCATTCCTGCCATTCAGGAAGGATTAATGACCAGCATTCAGACTCATGAAATCATGCTACTTACACATTTTAA
CCTGGGTGGTGTTTTACTCAGTGAACTACATCGTCTGGGAGAAAGCCGACTGGCAAACAGGCTGAACAGTCTGCTCCGGC
GTTTTGACGATCGCGATCTCTACCACACCCTGATATGGCTGTGCTGGTATGATCTGATGTGCGCCCACTCCATGCAGCCC
TGGACTGAAGAGTTAAAGCATAAATCACACGCAGAACTTGAAAGCTGGGCTGTGGCGCGCAAACGGGAAAAGCGCGAGCT
TGAACTGATGATTGACGAGTACCTGTTATACGCCTGTTGA

Protein sequence : 
MLRAKGENIMQKLENRCDLLLTQHQKWMASVTRFIVAHGMGSPHLHGYHRLTLAHFFLPEKGTIISVAPQGLYQVVNPGT
PPFIPAIQEGLMTSIQTHEIMLLTHFNLGGVLLSELHRLGESRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQP
WTEELKHKSHAELESWAVARKREKRELELMIDEYLLYAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00471.1 unknown Not tested SHI-1 Protein 1e-71 97
S3191 NP_838474.1 hypothetical protein Not tested SHI-1 Protein 1e-79 96
SF2988 NP_708762.1 hypothetical protein Not tested SHI-1 Protein 1e-79 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_49781 YP_003368343.1 hypothetical protein VFG0652 Protein 3e-80 96