Gene Information

Name : ROD_49761 (ROD_49761)
Accession : YP_003368341.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5228535 - 5229539 bp
Length : 1005 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTATCAAATGCAAAGATCCCCGTAAATGTCGGTTTTATGCCGAATATCTGAATCACAAATACCCCAATGAATTCCC
TCAGTTTGCGCCTGACAACCCACAAAACTGTATCAGAAATGTTAATGCATTTTTAAAAGAAAAGTATTATAAAGCTTCAA
ACAATTCTTTTGGTGTTTTTGGTTCGACTGCAGAAGAAGCTCTCAGCAAAGAAATTAATGAACTTGAAATTATTGCAGGG
CAGGCAATACTGCCTGAAGAGAGTTTTCTCTGGTTGAAAACTGACGAACTTGCGACTTTCTTTACCTGGACTACTATTTA
TCTGTCGAAGGAAGACCATACAAATCTCCCGGAAATAAACCATAATTCATCAGGGATAAAAAACGGAATTGAAGTCAGAA
AAAGACGAACAGTTACCGATGAAACGTTAAATACTTACAAAAAAAGTAACCTTCCGGATAATCCATCATCCCATAACGAA
CGAATAAAAGTAATCATTTCATATTTTGATTCCTGCCATTCTTTAATTAATAAAAATGCAAAAAGCATATATCTCGAGGA
GCTCAGGCAGGCGTGGCTTAAAAAGAAAAGCGCCTGTCAAAAGTTTAAGTGGCTCCTTCCTGACGATGATGAAATGTGTC
AGTGGTTCTGGACAAGACTGAAACAAAAACAGGATGAAACACATCCGGTACATAACCCAGTGACCCGGTGGTTCATACCA
TCTTCAACGAAAGAATATTATCTTGCCTCTCTCGTCGCCTTTGCTTTATGGAAAGAGGCACCTGATACCATTGAACTGTT
CAGAACACGCATAAATCATGCCTGGCATCAAAAAAAACAAAAAGACAAATATCGGAGTGATGGTAAAAAGGCTATTAATA
TACATATAAGAAGCAATGCAAAAGAAATGCTTGATGAACTCAGAACTGTTTACGGTCTGAGAACAGGAGAGTTTTTTGAA
ATGCTGATTACAGAAAAATATATTGAACACAAGCGAAGGAAGTAA

Protein sequence : 
MLIKCKDPRKCRFYAEYLNHKYPNEFPQFAPDNPQNCIRNVNAFLKEKYYKASNNSFGVFGSTAEEALSKEINELEIIAG
QAILPEESFLWLKTDELATFFTWTTIYLSKEDHTNLPEINHNSSGIKNGIEVRKRRTVTDETLNTYKKSNLPDNPSSHNE
RIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDETHPVHNPVTRWFIP
SSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNAKEMLDELRTVYGLRTGEFFE
MLITEKYIEHKRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00472.1 unknown Not tested SHI-1 Protein 2e-133 94
S4826 NP_838476.1 hypothetical protein Not tested SHI-1 Protein 2e-147 94
SF2989 NP_708763.1 hypothetical protein Not tested SHI-1 Protein 2e-147 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_49761 YP_003368341.1 hypothetical protein VFG0653 Protein 9e-148 94