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Name : ROD_49731 (ROD_49731) Accession : YP_003368339.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : adhesin autotransporter Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3468 EC number : - Position : 5224334 - 5227180 bp Length : 2847 bp Strand : - Note : similar to E. coli autotransporter adhesin involved in diffuse adherance (AIDA-I), and TibA DNA sequence : ATGAAACGACATCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGC CCGCTCACGGGGAAAACGCACCGGTGTGGCGGTTGCTCTGTCTTTTGCTGCTGTCACGTCAGTCCCGGCACTGGCTGCTG ACACAGTTGTACAGGCGGGAGAAACCGTGAGCGGCGGAACACTGGCAAATCATGACAACCAGATTGTCTTCGGTACGACC AACGAAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGATAACGAGGCCAATACCGGCGGACAATGGATACAAAATGG CGGTACCGCCAACAACACTACTGTCACCGGTGGTGGTCTTCAGAGAGTGAATGCCGGAGGAAGCGTTTCAGACACGGTTA TCAGTGCCGGAGGCGGACAGAGCCTTCAGGGGCAGGCACTGAACACCACTCTGAACGGCGGTGAGCAGTGGGTACATGAA GGCGGGATTGCAACGGGCACCGTCATTAATGAGAAGGGCTGGCAGGTCGTCAAACCCGGCGCAGTGGCAACCGACACGGT TGTGAATACCGGCGCGGAAGGGGGACCGGATGCAGAAAATGGTGATACCGGGCAGTTTGTTCGCGGAGATGCCGTACGTA CCACTATCAATGAAAATGGTCGTCAGATTGTGGCTGCTGAAGGAACAGCAAATACCACTGTGGTTTATGCTGGCGGCGAC CAGACTGTACACGGACATGCGCTGGATACCACGCTGAATGGGGGGTATCAGTATGTGCACAACGGCGGTACGGCGTCTGG CACTGTTGTAAACAGTGACGGCTGGCAGATTATCAAGGAAGGTGGTCTGGCGGATTTCACCACCGTTAACCAGAAAGGCA AACTGCAGGTGAACGCCGGTGGTACAGCCACGAATGTCACCCTGAAGCAGGGAGGCGCACTGGTCACCAGTACGGCGGCA ACCGTCACCGGCAGCAACCGTCTGGGCAATTTCACGGTGGAAAACGGTAATGCTGACGGTGTTGTACTGGAGTCCGGTGG TCGCCTGGATGTACTGGAGGGCCATTCAGCCTGGAAAACACTGGTGGATGACGGCGGTACCCTGGCAGTGTCTGCCGGTG GTAAAGCAACAGATGTCACCATGACATCCGGTGGTGCCCTGATTGCAGACAGTGGTGCCACTGTTGAGGGGACCAATGCC AGCGGTAAGTTCAGTATTGATGGCATATCCGGTCAGGCCAGCGGCCTGCTGCTGGAAAATGGTGGCAGCTTTACGGTTAA TGCCGGGGGACAGGCTGGCAACACCACTGTCGGACATCGTGGAACACTGACGCTGGCTGCCGGGGGAAGTCTGAGTGGCA GAACACAGCTCAGTAAAGGCGCCAGTATGGTACTGAATGGTGATGTGGTCAGTACCGGCGATATTGTTAACGCAGGAGAG ATTCACTTTGATAATCAGACGACACCGGATGCCGCGCTGAGCCGTGCTGTTGCAAAAGGCGACTCCCCGGTAACGTTCCA TAAACTGACCACCAGTAACCTCACCGGTCAGGGTGGCACCATCAATATGCGTGTTCGCCTTGATGGCAGCAATGCCTCTG ACCAGCTGGTGATTAATGGTGGTCAGGCAACCGGCAAAACCTGGCTTGCGTTTACAAATGTCGGAAACAGTAACCTCGGG GTGGCAACCTCCGGACAGGGTATCCGGGTTGTGGATGCACAGAATGGTGCCACCACAGAAGAAGGTTCGTTTGCCCTGAG TCGCCCGCTTCAGGCCGGCGCCTTTAACTACACCCTGAACCGTGACAGAGATGAAGACTGGTACCTGCGCAGTGAAAATG CTTATCGTGCTGAAGTCCCCCTGTATGCCTCCATGCTGACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGC AGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAA CGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAACGGCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTGAGAA CAGAGGTTGCCGGTATGTCTGTGACCGCGGGGGTATATGGTGTTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGAC GGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCAGTCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCT GTGGACTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCT GGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTAT ACCTGGCAGGGACTTTCCCTGGATGACGGCCAGGATAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGT GCGTGCCGGCTTCCGTCTGGGCAGCCACAACGATATGAACTTTGGTAAAGGCACCTCATCCCGTGACACCCTGCGCGACA GTGCAAAACACAGTGTGCGTGAACTGCCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGG AACATGAGCATGGGTACAGCCGCAGCCGGCAGTAACATGACGTTCTCACCGTCCCGGAATGGCACGACACTGGACCTGCA GGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGTGTCAGCGGCAGCA GCGCTGAAGGTTATAACGGTCAGGCCACGCTGAATGTGACTTTCTGA Protein sequence : MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAVALSFAAVTSVPALAADTVVQAGETVSGGTLANHDNQIVFGTT NEMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQALNTTLNGGEQWVHE GGIATGTVINEKGWQVVKPGAVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINENGRQIVAAEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAA TVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNA SGKFSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IHFDNQTTPDAALSRAVAKGDSPVTFHKLTTSNLTGQGGTINMRVRLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLG VATSGQGIRVVDAQNGATTEEGSFALSRPLQAGAFNYTLNRDRDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSR SHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTEVAGMSVTAGVYGVAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLVHTSSGLWTDIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQY TWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMNFGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRG NMSMGTAAAGSNMTFSPSRNGTTLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 97 |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 95 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| aec67 | AAW51750.1 | Aec67 | Not tested | AGI-3 | Protein | 0.0 | 65 |
| S3195 | NP_838479.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 64 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 60 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 60 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 60 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 58 |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_49731 | YP_003368339.1 | adhesin autotransporter | VFG1063 | Protein | 0.0 | 95 |
| ROD_49731 | YP_003368339.1 | adhesin autotransporter | VFG0655 | Protein | 0.0 | 60 |
| ROD_49731 | YP_003368339.1 | adhesin autotransporter | VFG1675 | Protein | 0.0 | 56 |
