Gene Information

Name : ROD_49711 (ROD_49711)
Accession : YP_003368337.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5222613 - 5223098 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence :
ATGACAACCGTTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACCGCTGTATCAGAGAATAACCCGCCTCAACTGGT
TGCCACCCTCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGCGGGGCATTTATGGCGCCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGTATTGCCGCCTGTCTGATGACGTACATCCATCATGCCTGTCGTACGGAGTGTT
ATGCCATGACGGTCCACTATTATCGGCTGCGGGATTACGCCCTACAGCATCCGGAATGCAGCGCCATTATGCGCATCATC
GACTGA

Protein sequence :
MTTVSHNSTTPSVSVTAVSENNPPQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYIHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 9e-61 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 7e-61 97
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 7e-61 97
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 5e-58 97
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 5e-58 97
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-57 96
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 1e-57 95
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-58 94
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 4e-64 94
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 6e-65 92
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 1e-62 92
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 6e-63 92
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-63 92
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 5e-64 92
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-59 91
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-59 91
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-59 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_49711 YP_003368337.1 antirestriction protein VFG0659 Protein 1e-58 97
ROD_49711 YP_003368337.1 antirestriction protein VFG1677 Protein 2e-64 94
ROD_49711 YP_003368337.1 antirestriction protein VFG1527 Protein 6e-64 92
ROD_49711 YP_003368337.1 antirestriction protein VFG1616 Protein 4e-63 92