|
Name : ROD_49481 (ROD_49481) Accession : YP_003368323.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : site-specific DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 5211909 - 5212505 bp Length : 597 bp Strand : + Note : - DNA sequence : ATGATACTTAGGGCAGGGAGAGACATAATGAGCAAGACTTTCGGTTACATCCGAGTGAGCAGCAAGGACCAGAACGAAGC ACGTCAGGTAGAAGCGCTCAAGGGCCTTTGCGATGACTTGATGATTGACAAGGTATCTGGCAAGAATGCTGACCGTCCAG AACTACAGGAGCTACTCAAGGTGGTTCGTCGTGGTGATGTGGTGGTGGTCAAGAGTGTGGACCGTTTAGCCCGTAACACA AAAGACCTTCTGACCATCCTTGAGACCCTTGTTGACGCTGGCGTTACGGTTCGATTCATTGATAACCAGATGATCTTTGA TGATACGCCCACCAGCCGCTTTATGATTACCATGTTGGGGGCTGTAGGTGAGCTTGAGCGTTCATTCATCCGGCAGCGTC AGAGTGAAGGGGTGGCGATAGCTAAGGCTGAGGGAAAGTTTAAGGGCCGTCAGAAGGATGACCAGTTAAGGGCTGAGGTG GTGAAGCTATTGGGCCGTGGAGACTTGAGCGCTGACCAGATTGCTAAACTTGCTGGATGTGGGAGAGCTACAGTGTTCAG AATTAAGAAGGAGTTAAGTAATGAGGTTGCGAAGTAA Protein sequence : MILRAGRDIMSKTFGYIRVSSKDQNEARQVEALKGLCDDLMIDKVSGKNADRPELQELLKVVRRGDVVVVKSVDRLARNT KDLLTILETLVDAGVTVRFIDNQMIFDDTPTSRFMITMLGAVGELERSFIRQRQSEGVAIAKAEGKFKGRQKDDQLRAEV VKLLGRGDLSADQIAKLAGCGRATVFRIKKELSNEVAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpR | AAL08439.1 | resolvase TnpR | Not tested | SRL | Protein | 2e-19 | 44 |
| tnpR | AFV53121.1 | Tn21 resolvase | Not tested | AbGRI2-1 | Protein | 2e-19 | 44 |
| tnpR | YP_006098373.1 | transposon Tn21 resolvase | Not tested | Tn2411 | Protein | 3e-19 | 44 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 6e-12 | 44 |
| tnpR | ACF06154.1 | resolvase | Not tested | Tn5036-like | Protein | 3e-17 | 42 |
| tnpR | ACY75537.1 | TnpR | Not tested | Tn6060 | Protein | 5e-18 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_49481 | YP_003368323.1 | site-specific DNA recombinase | VFG1030 | Protein | 9e-20 | 44 |
