Gene Information

Name : xerD (ROD_49391)
Accession : YP_003368313.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 5199458 - 5200354 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
GTGGAAAAGGATCTCGCACGCATCGAACAGTTTCTTGATGCGCTGTGGCTGGAGAAAAATCTGGCGGAAAACACCCTGAG
CGCCTACCGTCGCGATCTCACCATGCTGGTGGAGTGGCTTGCGCATCGCAAGGCGTCGCTGGAAACCGCGCAAAGCGAGG
ATCTGCAGGCGCTGCTGGCCGAGAGGATGGACGGCGGTTATAAAGCGACCAGTACGGCGCGGCTGCTGAGCGCGGTGCGT
CGGCTTTTTCAGCACCTGTATCGCGAAAAGATTCGCCCGGACGATCCGAGCGCCGCGCTGGCGTCGCCCAAACTGCCGCA
GCGCCTGCCGAAAGATCTCAGTGAAGCGCAGGTGGAGAGATTATTACAGGCGCCGGTGGTTGACCAGCCGCTGGAGTTAC
GCGATAAAGCGATGCTTGAGATCCTTTACGCCACCGGTTTGCGCGTGTCGGAGCTTGTCGGACTAACGATGAGCGACGTC
AGCCTGCGGCAGGGCGTGGTCCGCGTGATCGGCAAAGGCAACAAAGAGCGCCTCGTTCCGCTGGGCGAAGAGGCGGTGTA
CTGGCTGGAGACGTATCTGGAACATGGGCGGCCCTGGCTACTCAACGGCGTGTCGATTGACGTGCTGTTCCCCAGCCAGC
GCGCGCAGCAGATGACGCGCCAGACTTTCTGGCATCGTATTAAACATTATGCGGTGCTGGCGGGAATCGACAGCGAAAAG
CTGTCGCCGCACGTTTTGCGTCACGCCTTTGCGACACATTTGCTTAATCATGGCGCTGACCTGCGCGTGGTGCAGATGCT
GCTGGGACACAGCGATCTCTCCACGACGCAAATTTATACCCATGTCGCGACCGAACGCTTGCGTCAACTTCATCAACAGC
ATCATCCAAGGGCATGA

Protein sequence :
MEKDLARIEQFLDALWLEKNLAENTLSAYRRDLTMLVEWLAHRKASLETAQSEDLQALLAERMDGGYKATSTARLLSAVR
RLFQHLYREKIRPDDPSAALASPKLPQRLPKDLSEAQVERLLQAPVVDQPLELRDKAMLEILYATGLRVSELVGLTMSDV
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-62 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-62 53