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Name : deoA (ROD_49051) Accession : YP_003368284.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 4.1.2.4 Position : 5167491 - 5168813 bp Length : 1323 bp Strand : + Note : - DNA sequence : GTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGTGATGAAGAGATCCGCTTCTTTATCAA CGGCATTCGTGACAATACCGTTTCGGAAGGTCAGATTGCCGCCCTGGCGATGACCATCTTCTTCCACGATATGACCATGC CGGAGCGCGTATCGCTGACGATGGCAATGCGGGATTCAGGCACCGTCCTGGACTGGAAGAGTCTGCAACTGAACGGCCCA ATCGTTGATAAACACTCCACCGGCGGGGTGGGCGATGTAACATCGCTGATGCTGGGGCCGATGGTCGCGGCCTGCGGCGG CTATGTGCCGATGATCTCCGGTCGCGGCCTCGGTCATACCGGCGGTACGCTCGACAAACTGGAAGCCATTCCGGGCTTCG ATATCTTCCCGGACGACAACCGTTTCCGCGACATTATTAAAGAGGTGGGCGTAGCGATTATCGGGCAGACCAGTTCGCTC GCCCCGGCGGACAAACGTTTTTATGCCACCCGCGATATTACCGCGACGGTGGACTCCATACCGCTGATTACCGCTTCCAT ACTGGCGAAAAAGCTGGCCGAAGGGCTGGATGCGCTGGTGATGGACGTGAAAGTTGGCAGCGGCGCGTTTATGCCGACGT ATGAACTTTCTGCAGCGCTTGCCGAAGCGATTGTCGGCGTGGCGAACGGCGCGGGTGTCCGTACGACCGCGCTGCTTACC GACATGAATCAGGTGCTGGCCTCCAGTGCCGGTAACGCGGTGGAAGTGCGCGAGGCGGTGCAGTTCCTGACCGGCGAATA TCGTAACCCGCGCCTGTTTGACGTCACGATGGCGCTGTGCGTTGAGATGCTCATCTCCGGCCAGCTGGCGAAAGACGATG CCGAAGCGCGCGCGAAGCTGCAGGCGGTGCTGGACAACGGCAAAGCGGCTGAGGTGTTTGGCCGGATGGTCGCCGCGCAG AAAGGGCCGACCGACTTAGTGGAAAATTACGCGAAATATCTGCCGTCGGCGATGCTCAGCAAAGCGGTCTATGCCGATAC CGAAGGCTTTGTGTCGGCGATGGATACCCGTGCGCTGGGCATGGCGGTAGTGTCAATGGGCGGCGGGCGTCGCCAGGCGT CCGATAGCATTGATTACAGCGTCGGCTTTACCGATATGGTTCGCCTGGGCGACGGCGTTGACGGACAGCGTCCGCTGGCG GTCATCCACGCCAAAGATGAAGCCTGCTGGCAGGATGCGGCGCAGGCGGTGAAAGCGGCAATTACTCTTGACGATAAAGC GCCTGAAATTACGCCAACGGTCTATCGTCGTATTACCGAATAG Protein sequence : MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTVSEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLQLNGP IVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDNRFRDIIKEVGVAIIGQTSSL APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSAALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGQLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQ KGPTDLVENYAKYLPSAMLSKAVYADTEGFVSAMDTRALGMAVVSMGGGRRQASDSIDYSVGFTDMVRLGDGVDGQRPLA VIHAKDEACWQDAAQAVKAAITLDDKAPEITPTVYRRITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-68 | 42 |
