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Name : ROD_48321 (ROD_48321) Accession : YP_003368220.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : S : Function unknown COG ID : COG5464 EC number : - Position : 5102043 - 5102984 bp Length : 942 bp Strand : + Note : - DNA sequence : ATGAGCAAATCGACCACATCCACACCGCATGACGCCGTGTTTAAGACCTTCCTGCGCCACCCGGAAACCGCCAGGGATTT TCTGGATATCCATCTTCCGGCTTCGCTGCGCAAACGTTGCGATTTGCAGACGCTGAAGCTGGAGCCCACCAGTTTTATTG AAGACGATCTGCGCACGTATTATTCAGACGTGCTGTGGTCGTTAAAAACCGGGGAGGGCGATGGCTATATCTATGTGGTT ATTGAACATCAGAGCACGCCCGATGCGCATATGGCTTTCAGGCTGATGCGCTATGCCATCGCAGCGATGCAGCAGCATCT GGACGCCGGGCATAAGCGGCTGCCGCTGGTGGTGCCGATGCTGTTCTATCACGGTGCGGACAGTCCCTATCCTTTTTCAC TTAACTGGCTGGATGAGTTTACCGATCCGGCGCTGGCGCATCAGCTCTATAGCGCGGCGTTTCCGCTGGTGGATATCACC GTTATCCCGGACGATGAAATTATGCAGCACCGGCGGGTAGCGCTGCTGGAGCTGATCCAAAAGCATATCCGCAGACGGGA TCTGCTGGGGTTGGTGGAACAACTCGCCTCGCTGCTGATTAGTGGAGGCGCTAATGACAGACAGTTGAAATCGCTGTTTA ATTATCTGCAGAGACAACATGGACATACGCCCCGCTTCAGCATGTTTCTGGAAGAAGTGGCGGAGCGCGTGCCTCAGCAT AAGGAGCGATTAATGACGGTTGCAGAAAGATTTCGCAATGCGATCCTCAGAAAAGGGATTCGGCAAGGGAAACAGGAAGG CAAAGAGGAAGGATTGATTGAAGGACAGCGTGCTGCCGCCCGGCGCATTGCCCGCACGATGCTGGAGGAGGGCATCGACC ATCAAACGATACAGCGGCTGACCGGGCTTTCCGCAGAAGAGATGCATAATGTGATGCATTGA Protein sequence : MSKSTTSTPHDAVFKTFLRHPETARDFLDIHLPASLRKRCDLQTLKLEPTSFIEDDLRTYYSDVLWSLKTGEGDGYIYVV IEHQSTPDAHMAFRLMRYAIAAMQQHLDAGHKRLPLVVPMLFYHGADSPYPFSLNWLDEFTDPALAHQLYSAAFPLVDIT VIPDDEIMQHRRVALLELIQKHIRRRDLLGLVEQLASLLISGGANDRQLKSLFNYLQRQHGHTPRFSMFLEEVAERVPQH KERLMTVAERFRNAILRKGIRQGKQEGKEEGLIEGQRAAARRIARTMLEEGIDHQTIQRLTGLSAEEMHNVMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3726 | YP_001402680.1 | transposase | Not tested | YAPI | Protein | 2e-89 | 59 |
| pilW | CAF28495.1 | putative transposase | Not tested | YAPI | Protein | 1e-88 | 58 |
| YE3497 | YP_001007658.1 | putative transposase | Not tested | YAPI | Protein | 2e-87 | 57 |
| tnp | AAN64216.1 | transposase | Not tested | necrotizing factor locus | Protein | 3e-83 | 54 |
| PMI2627 | YP_002152329.1 | transposase | Not tested | Not named | Protein | 1e-66 | 47 |
