Gene Information

Name : kdsD (ROD_46231)
Accession : YP_003368029.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 4878295 - 4879176 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGTCGCACTTAGCGTTACAACCGGGTTTTGACTTTCAGCAGGCCGGAAAAGAGGTCCTGGCGATTGAACGTGAAGGCCT
CGCGGAACTCGATCAGTATATCAATCAGGATTTTACCCTCGCCTGCGAAAAGATGTTCAACTGCACCGGTAAAGTCGTGG
TCATGGGCATGGGCAAATCGGGACATATCGGCCGCAAAATGGCCGCGACCTTCGCCAGCACCGGCACCTCGTCCTTTTTT
GTCCACCCTGGCGAAGCCGCCCACGGCGATCTGGGCATGGTGACCGCGCAGGACGTGGTGATTGCCATCTCCAACTCCGG
CGAATCCAGCGAAATTGCCGCCTTAATCCCGGTGCTGAAACGCCTTCAGGTGCAGCTTATTTGCATTACGGGGCGTCCGG
AAAGCACCATGGCGCGAGCCGCGGATGTGCATCTGTGTGTTAAAGTACCGAAAGAGGCCTGTCCGTTAGGACTGGCGCCG
ACCAGTAGCACCACGGCCACGCTGGTAATGGGCGATGCGCTGGCGGTGGCGCTGTTAAAGGCGCGCGGCTTTACCGCCGA
GGATTTCGCGTTATCCCATCCGGGCGGCGCGCTGGGGCGTAAACTTCTGCTGCGCGTGAACGATATTATGCATACGGGCG
AGGAAATCCCCCACGTGCGCAAAGAGGCCAGCCTGCGCGATGCGCTGCTGGAGATCACCCGCAAAAATCTGGGCATGACC
GTAATTTGCGATGAGACGATGAAGATCGATGGCATCTTCACCGACGGTGATTTACGCCGCGTCTTTGATATGGGCGTTGA
CGTGCGGCAGTTAGGCATTGCCGACGTTATGACGCCGGGCGGCATCCGCGTGCGCCCGGCATTCTGGCGGTCGATGCGCT
GA

Protein sequence : 
MSHLALQPGFDFQQAGKEVLAIEREGLAELDQYINQDFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFF
VHPGEAAHGDLGMVTAQDVVIAISNSGESSEIAALIPVLKRLQVQLICITGRPESTMARAADVHLCVKVPKEACPLGLAP
TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGEEIPHVRKEASLRDALLEITRKNLGMT
VICDETMKIDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPAFWRSMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 8e-43 45
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-43 45
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-43 45