Gene Information

Name : nanE (ROD_45991)
Accession : YP_003368005.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : N-acetylmannosamine-6-phosphate 2-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3010
EC number : -
Position : 4850953 - 4851642 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGTTACTTACACAACTGGATAAAAACATTGCCGCAAACGGCGGCCTGATTGTCTCCTGTCAGCCGGTTCCCGGCAG
CCCGCTGGATAAGCCGCAAATTGTCGCGGCGATGGCGCTGGCGGCGGAGCAGGCGGGAGCGGTTGCTCTGCGTATTGAGG
GCGTTGAAAATTTACGCGCAACCCGCGCAGTGGTATCGCTACCGATTATCGGTATTCTCAAGCGCGATCTCGACGATTCG
CCGGTGCGCATCACCGCGTTTACCGAAGATGTGGATGCGCTGGCGCAGGCCGGTGCGGACATTATCGCCTTCGATGGCAC
CGATCGCGCGCGCCCTGTGCCGGTGGACGAGTTACTTGCGCGCATCCACCGCCACCAGCGTCTGGCAATGGCGGACTGCT
CCACGCTGCAGGACGGACTGGCCTGTCAGAAACGGGGAGCGGAAATTATTGGCACTACGCTTTCCGGCTACACGACGCCG
GATACGCCGGAGGAGCCGGATCTTGCGCTGGTGCAAGCGCTCAGCGAGGCTGGCTGTCGGGTGATTGCCGAAGGGCGCTA
TAACACCCCGGCGCAGGCTGCTGAAGCGATGCGTCACGGCGCCTGGGCGGTAACGGTCGGTTCCGCCATCACCCGGCTGG
AGCATATCTGCGGCTGGTACAACACGGCGCTGAAAAAGGCGGCGCTATGA

Protein sequence : 
MSLLTQLDKNIAANGGLIVSCQPVPGSPLDKPQIVAAMALAAEQAGAVALRIEGVENLRATRAVVSLPIIGILKRDLDDS
PVRITAFTEDVDALAQAGADIIAFDGTDRARPVPVDELLARIHRHQRLAMADCSTLQDGLACQKRGAEIIGTTLSGYTTP
DTPEEPDLALVQALSEAGCRVIAEGRYNTPAQAAEAMRHGAWAVTVGSAITRLEHICGWYNTALKKAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1781 NP_231416.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-43 59
VC0395_A1378 YP_001217321.1 N-acetylmannosamine-6-phosphate 2-epimerase Not tested VPI-2 Protein 2e-43 59
nanE ACA01846.1 N-acetylmannosamine-6-phosphate epimerase Not tested VPI-2 Protein 2e-43 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nanE YP_003368005.1 N-acetylmannosamine-6-phosphate 2-epimerase VFG1114 Protein 6e-44 59