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Name : gspF (ROD_44951) Accession : YP_003367902.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Virulence Product : T2SS protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 4749465 - 4750664 bp Length : 1200 bp Strand : - Note : - DNA sequence : ATGAAATTTAGCTGGCACGCAACCGATATGCAGGGTGAGACTGTAAGAGGGGTAACGGAGGCCAACAGCGAGCGGGACGT GGTCGCTTTTTTACGCGCGCAGGGACTGTTACCGCTGTCGATCAAAGCACAGCGCCACGCGCTATCCCTGTCCCTGCCCG GCCAGCGGATCAGCCACGGCGATTTAACGCTTTTTACCCGTCAGCTCGCGACGCTGATTGCCGCGGCGCTGCCGCTTGAT GAAGCGCTGGCCATCATTCAGCAGCAGAAAGAGAACAAAAAGCTCTCATCAGTGATCAACGGGTTACGCCTGGCCGTGCT GGAAGGCCAGTCGCTTTCCAGAGCAATGCAGAACCATCCCCGTCTGTTCGATGATGTATTCTGCACGCTGGTAAAAGCCG GCGAAACCGTCGGCCAGTTGGGCGGCGTTCTCGAACGGCTGGCCGATTTTAATGAAACCCGCCAGAGGATGCGTAGCAAA CTGACTCAGGCGCTGATCTATCCCGTACTGCTGACGACCGTCGCTATCCTCGTCGTGGCGATCTTACTCACCACCGTGGT GCCGAAGGTGGCGGCACAGTTTCTTCATCTCAAACATGAACTGCCGCTGACGACGCGCATTCTGCTGGCTATCAGTGATT TTCTCTCCGCCTGGGGTCCGGGGCTCCTGCTCTTCTTCGCCGCGCTGGCCGCCCTGTTTTCATTCTGGCTACGACGTAAC GGCAATCGCCTGCGTTTTCATCGTTTCCTGATCGCATTCCGCTTAACCGCGCCGCTGGTCTGCGCGGTCAACAGCGCCCG CTATTTGCGCGCGTTGAGCATTCTCAATAATAGTGGCGTCCCGCTGCTACAGGGGATGGAGCTATCGGCGGAAGGGGTCG GCAATCTGGCTATCCGCCATCGGCTTAGCGAAGCGGCAGAGAGCGTGCGCCAGGGAAACAGTATTCACCGCTCGCTGGCG CAGACGGAGATCTTCCCCACCATGATGCTTTATATGATCGCCTCAGGGGAAAAAAGCGGCGAGCTTGGCGCACTGATGCA GCGGGCAACGGAGAATCAGGAGACTCATCTGCAGAACCGAATCGCTCTGGCGCTGGCCATCTTCGAACCCGCTCTGATTG TCATCATGGCGATGATCGTTCTGTTTATCGTGGTGTCCGTTATGCAACCGATTTTGCAACTCAATACGTTAATGAACTAA Protein sequence : MKFSWHATDMQGETVRGVTEANSERDVVAFLRAQGLLPLSIKAQRHALSLSLPGQRISHGDLTLFTRQLATLIAAALPLD EALAIIQQQKENKKLSSVINGLRLAVLEGQSLSRAMQNHPRLFDDVFCTLVKAGETVGQLGGVLERLADFNETRQRMRSK LTQALIYPVLLTTVAILVVAILLTTVVPKVAAQFLHLKHELPLTTRILLAISDFLSAWGPGLLLFFAALAALFSFWLRRN GNRLRFHRFLIAFRLTAPLVCAVNSARYLRALSILNNSGVPLLQGMELSAEGVGNLAIRHRLSEAAESVRQGNSIHRSLA QTEIFPTMMLYMIASGEKSGELGALMQRATENQETHLQNRIALALAIFEPALIVIMAMIVLFIVVSVMQPILQLNTLMN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-68 | 44 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-66 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_003367902.1 | T2SS protein F | VFG2049 | Protein | 3e-64 | 44 |
| gspF | YP_003367902.1 | T2SS protein F | VFG0181 | Protein | 2e-61 | 41 |
