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Name : ctsH4 (ROD_44051) Accession : YP_003367812.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : Hcp family T6SS protein CtsH4 Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 4655549 - 4656028 bp Length : 480 bp Strand : - Note : Hcp homologue DNA sequence : ATGGCACACTTATCCTGGTTAACCCTGAAAGGTGAGTTACAAGGGGATATATCTGCACGATGCGGCTCCCGGAACTCAAT AGGAAATAAATCACAAACCCGTCATCTGGATCAGATATTGATTTATGGGCTTGATCATGAGACAACGCGCCAGCAAAATG TTTGTCATCATGAGTTGCGAATCGTTAAGCCTGTTGATCGCGCCTCTCCTTTACTCAATAAAGCCATTAACGATAACGAG TCGCTTGATTGCATCATCGATCTCTATCGGGTCAGTCCAGGCGGTCAGCTGGAGGTTTATTATAAAATTAAATTATACAA GGCTCATATCTCTCACATAAATATTATCGTCCCACATAATATTATTGAAAGTGGGAATGAAGCTCAAGAACGGGTTTCTT TTATTTATGAATCCATCAGTTGGGAACACTGTATGGCAAGCACCAGCGCTTTCAGTTTATGGAGCGACCGTCGCATCTGA Protein sequence : MAHLSWLTLKGELQGDISARCGSRNSIGNKSQTRHLDQILIYGLDHETTRQQNVCHHELRIVKPVDRASPLLNKAINDNE SLDCIIDLYRVSPGGQLEVYYKIKLYKAHISHINIIVPHNIIESGNEAQERVSFIYESISWEHCMASTSAFSLWSDRRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 4e-38 | 56 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 2e-38 | 56 |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 1e-29 | 46 |
