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Name : xylA (ROD_42411) Accession : YP_003367655.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : D-xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4473426 - 4474748 bp Length : 1323 bp Strand : + Note : - DNA sequence : ATGCAGGCATATTTTGACCAACTCGACCGTGTTCGTTTCGAAGGCCCTAAGTCCACTAACCCTCTGGCATTCCGTCACTA CAACCCGGATGAAATCGTGCTGGGCAAACGGATGGAAGATCATTTGCGTTTCGCCGCCTGCTACTGGCACACCTTCTGCT GGAACGGGGCGGATATGTTTGGCGTCGGCGCGTTTGACCGCCCCTGGCAGCAGCCGGGCGAAGCCCTGGCGCTGGCAAAA CGCAAAGCGGACGTGGCGTTTGAATTCTTCCACAAGCTGAACGTTCCGTTCTACTGCTTCCACGATGTCGACGTTTCACC GGAAGGCGCGTCGCTCAAAGAGTATAAAAACAACTTCGCCCAGATGGTCGATGTGCTGGCTGCGAAGCAGGAAGAGAGCG GCGTGAAGCTGCTGTGGGGCACGGCGAACTGTTTCACCAACCCGCGCTACGGCGCAGGCGCGGCGACCAACCCGGACCCG GAAGTCTTTAGCTGGGCGGCGACCCAGGTGGTTACGGCAATGGACGCCACTCACAAACTGGGCGGCGAAAACTACGTGCT GTGGGGCGGTCGTGAAGGCTATGAAACTCTGCTGAACACCGATCTGCGCCAGGAGCGTGAGCAAATTGGCCGCTTCATGC AGATGGTGGTCGAGCACAAGCACAAAACCGGCTTCCAGGGCACGCTGCTGATTGAACCAAAACCGCAGGAACCGACCAAA CACCAGTATGATTACGATGCGGCCACCGTTTACGGCTTCCTGAAACAGTTCGGTCTGGAAAAAGAGATCAAGCTGAACAT TGAAGCCAACCACGCGACGCTGGCGGGACACTCCTTCCATCATGAAATCGCCACCGCTATCGCGCTGGGCCTGTTTGGTT CCGTCGATGCCAACCGCGGCGACGCGCAGTTAGGCTGGGATACCGACCAGTTCCCGAACAGCGTGGAGGAGAACGCGCTG GTAATGTATGAAATCCTGAAAGCGGGCGGTTTCACCACCGGCGGCCTGAACTTTGACGCGAAAGTCCGTCGTCAGAGCAC CGACAAATACGATCTGTTCTATGGTCATATTGGCGCGATGGATACGATGGCGCTGTCGCTGAAAATCGCCGCGCGCATGA TTGAAGATGGCGAACTGGATAAACGCGTGGCAAAACGTTACGCCGGCTGGAACAGCGAGCTGGGTCAGCAGATCCTCAAG GGCCAGATGTCGTTAAGCGAACTGGCGCAGTATGCTGAACAGCATAACCTGGCGCCGGTACATCAGAGCGGCCATCAGGA ACTGCTGGAAAACCTGGTTAACCACTACCTGTTCAATAAATAA Protein sequence : MQAYFDQLDRVRFEGPKSTNPLAFRHYNPDEIVLGKRMEDHLRFAACYWHTFCWNGADMFGVGAFDRPWQQPGEALALAK RKADVAFEFFHKLNVPFYCFHDVDVSPEGASLKEYKNNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP EVFSWAATQVVTAMDATHKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKTGFQGTLLIEPKPQEPTK HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENAL VMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKIAARMIEDGELDKRVAKRYAGWNSELGQQILK GQMSLSELAQYAEQHNLAPVHQSGHQELLENLVNHYLFNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-105 | 48 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-105 | 48 |
