|
Name : ROD_40701 (ROD_40701) Accession : YP_003367506.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : ISCro1 transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 4311034 - 4311381 bp Length : 348 bp Strand : + Note : - DNA sequence : ATGATATCTCTCCCTGCAGGTTCGCGTATCTGGCTGGTTGCAGGTATCACCGATATGCGAAATGGCTTTAACGGCCTGGC ATCAAAAGTTCAGAACGTCCTGAAGGATGACCCGTTCTCCGGACACCTGTTCATCTTCCGCGGACGCCGGGGTGACCAGA TAAAAGTGTTGTGGGCTGACAGTGACGGACTGTGCCTCTTCACCAAACGCCTGGAGCGGGGCCGCTTCATCTGGCCAGTC ACCCGTGACGGCAAGGTGCACCTTACTCCGGCTCAGTTATCCATGCTTCTTGAAGGTATCAACTGGAAGCACCCGAAACG AACGGAACGCGCTGGAATCCGCATATAA Protein sequence : MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFIWPV TRDGKVHLTPAQLSMLLEGINWKHPKRTERAGIRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pB171ORF50 | CAD66190.1 | ORF50 protein of pB171 | Not tested | PAI III 536 | Protein | 1e-49 | 99 |
| aec52 | AAW51735.1 | Aec52 | Not tested | AGI-3 | Protein | 5e-50 | 99 |
| unnamed | ADD91739.1 | hypothetical protein | Not tested | PAI-I AL862 | Protein | 5e-50 | 99 |
| ECO103_3553 | YP_003223420.1 | hypothetical protein | Not tested | LEE | Protein | 6e-45 | 81 |
| Z4316 | NP_289542.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-45 | 81 |
| ECUMN_3327 | YP_002414007.1 | putative transposase ORF2, IS66 family | Not tested | Not named | Protein | 2e-39 | 77 |
| c3561 | NP_755436.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 2e-39 | 77 |
| l0014 | CAD33776.1 | L0014 protein | Not tested | PAI I 536 | Protein | 2e-30 | 76 |
| unnamed | ACU09438.1 | IS66 family element orf2 | Not tested | LEE | Protein | 4e-39 | 76 |
| c3578 | NP_755453.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 6e-39 | 76 |
| Z4336 | NP_289561.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-39 | 76 |
| unnamed | AAC31493.1 | L0014 | Not tested | LEE | Protein | 4e-39 | 76 |
| Z5097 | NP_290248.1 | prophage-associated protein | Not tested | LEE | Protein | 6e-39 | 76 |
| hp4 | AAC61716.1 | Hp4 | Not tested | PAI I CFT073 | Protein | 4e-39 | 76 |
| ECs4546 | NP_312573.1 | hypothetical protein | Not tested | LEE | Protein | 6e-39 | 76 |
| Z1132 | NP_286667.1 | hypothetical protein | Not tested | TAI | Protein | 3e-38 | 76 |
| unnamed | AAL99258.1 | unknown | Not tested | LEE | Protein | 4e-39 | 76 |
| Z1571 | NP_287075.1 | hypothetical protein | Not tested | TAI | Protein | 3e-38 | 76 |
| unnamed | AAL08461.1 | unknown | Not tested | SRL | Protein | 7e-39 | 75 |
| Z1160 | NP_286695.1 | hypothetical protein | Not tested | TAI | Protein | 1e-38 | 71 |
| Z1599 | NP_287103.1 | hypothetical protein | Not tested | TAI | Protein | 1e-38 | 71 |
| ECUMN_3364 | YP_002414037.1 | putative transposase ORF2, IS66 family | Not tested | Not named | Protein | 1e-38 | 70 |
| ECO103_3567 | YP_003223430.1 | hypothetical protein | Not tested | LEE | Protein | 7e-38 | 70 |
| Z4338 | NP_289563.1 | hypothetical protein | Not tested | OI-122 | Protein | 7e-38 | 70 |
| BCAM0247 | YP_002232879.1 | putative transposase | Not tested | BcenGI11 | Protein | 2e-30 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1665 | Protein | 4e-50 | 99 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1698 | Protein | 4e-40 | 77 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1517 | Protein | 9e-31 | 76 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1709 | Protein | 2e-39 | 76 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG0792 | Protein | 2e-39 | 76 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1052 | Protein | 3e-39 | 75 |
| ROD_40701 | YP_003367506.1 | ISCro1 transposase B | VFG1737 | Protein | 4e-39 | 70 |
