Gene Information

Name : ROD_37331 (ROD_37331)
Accession : YP_003367173.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3912482 - 3913441 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGTGCAACCCGTTATTGGTATCAGCGGATGTTTAACCGGTTCGGCCGTCCGCTTTGACGGCGGGCATAAACGCAT
GGGCTTTGTGATGGACGAGCTGGCGCAGTGGGTGACGTTTAAACCGGTCTGCCCGGAGATGGCGATAGGGTTGCCCGTTC
CCCGCCCGGCGCTGCGCCTGGTGCAGACGCCTGAAGGGGACACCCGGATGCGCTTCAGCCATGCGCCGCATGACGACGTC
ACAGAGAAAATGACCGCGTTTGCCGATACTTTTCTCCCGCGACAGGGCAACCTGGCGGGCTTTATCGTCTGTGCGAAATC
GCCCAGTTGCGGCATGGAGCGGGTGCGGCTGTACGATGAAAAAGGCAACCGCGGGCGCAAAGAGGGCGTCGGCCTGTTTA
CCGGCGCCTTAATGGCGAGCTATCCCTGGCTGCCCGTTGAGGAGGATGGACGCCTGCACGATCCGGCGCTGCGCGAGAAT
TTTGTCGAGCGGGTATTTGCCCTGCATGAGCTGAATACGCTGCGCGAAAACGGCCTGACGCGTCGTGCGCTACTGGACTT
CCACAGCCGCTATAAACTGCAACTGCTGGCGCACCATCAGGCGGGATACCGTGAAATCGGGCCGTTTGTCGCCTCATTAC
ACGAATGGGAAGATCTGGACGCCTTCTTTATCGCGTATCGGGAAAAGCTGATGGCGATTCTGAAAAAACCGGCCTCGCGG
AAAAACCATACCAACGTCCTGATGCACATTCAGGGGTACTTCCGTAACCAGCTTAACAGCCGCCAACGCGGCGAGCTGCG
TGAGGTGATCCTTAACTACCGCGCGGGATTGCTGCCCATCCTCGCACCGTTGACGCTGCTGAAGCACTATCTGGCCGAAT
ACCCGGATCGCTACCTGCTGACGCAAAACTATTTTGACCCATACCCGCATGATTTGGCATTACGCCTGGCGGTGAATTAA

Protein sequence : 
MNVQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVTFKPVCPEMAIGLPVPRPALRLVQTPEGDTRMRFSHAPHDDV
TEKMTAFADTFLPRQGNLAGFIVCAKSPSCGMERVRLYDEKGNRGRKEGVGLFTGALMASYPWLPVEEDGRLHDPALREN
FVERVFALHELNTLRENGLTRRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFIAYREKLMAILKKPASR
KNHTNVLMHIQGYFRNQLNSRQRGELREVILNYRAGLLPILAPLTLLKHYLAEYPDRYLLTQNYFDPYPHDLALRLAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 9e-127 81
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 9e-127 81
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-127 80
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-126 80
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-126 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROD_37331 YP_003367173.1 hypothetical protein VFG0490 Protein 5e-127 80