Gene Information

Name : fII (ROD_36521)
Accession : YP_003367096.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : phage tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 3843052 - 3843564 bp
Length : 513 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGTACCAAAACATCTTCGCTTTTTTACGTTGTTTGTGGATGGTGAAAACGAAGTGGGTAAAGTGACATCCGTCAC
GCCGCCCAAACTGACGCGCAAAACCGACAGCTATCGTGGTGGTGGCATGATGGGGGCGGTAAGTATTGATCTCGGTCTGG
ACGACTCCGCGCTTGATGCGAGTTTTGTTATGGGGGGAGCTGTTCGTGCGCTGTTCCTTAAATATGGCGGCACGATTGAC
GGCACGCTGCTGCGTTTTGCGGGTGAATACTACACCGATGCAGAAAGCGATCTGTATGAAATCGAGATGCGCGGGCGTGT
GACGGAAATTGATATGGGGGAAGCCAAACAGGGCGAAGCCACATCACACACTTACGCTGTCAAAAACACCTACTACAAGC
TGAGCGTTAACGATCGCCCGCTGTGGGAAATCGACCTGTTGAACCACATCTACCGGAAGGACGGCAAGGACATTGTGCCT
GACCGTATCCGTTCCGCGCTTGGGCTTGGCTGA

Protein sequence :
MAVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRALFLKYGGTID
GTLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEATSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVP
DRIRSALGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-19 46
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-19 46
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 5e-21 42