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Name : dnaB (ROD_36391) Accession : YP_003367084.1 Strain : Citrobacter rodentium ICC168 Genome accession: NC_013716 Putative virulence/resistance : Unknown Product : replicative DNA helicase protein DnaB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3832037 - 3833452 bp Length : 1416 bp Strand : - Note : - DNA sequence : ATGGCAGGAAATAAACCCTTCAACAAACAACAGACTGATGCCCGTGAGCGCGACCCGCAGGTTGCCGGGCTGAAAGTGCC GCCGCACTCGATTGAAGCGGAACAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAGCGCTGGGACGACGTTGCCGAAC GCGTGGTGGCGGATGATTTTTATACCCGTCCGCATCGTCATATCTTTACCGAGATGGGGCGGTTGCAGGAGAGCGGCAGT CCGATCGATCTGATTACGCTTGCAGAATCCCTTGAGCGTCAGGGGCAACTGGACAGCGTCGGCGGCTTTGCGTATCTGGC TGAACTGTCAAAGAATACGCCAAGCGCGGCGAACATCAGCGCCTACGCCGATATCGTGCGCGAGCGCGCCGTTGTGCGCG AAATGATCTCCGTGGCTAATGAGATAGCCGAAGCGGGTTTCGATCCGCAGGGGCGCACCAGCGAAGACCTGCTCGATCTC GCCGAATCCCGCGTCTTTAAAATTGCCGAAAGCCGGGCCAATAAAGACGAAGGGCCAAAAAATATCGCCGATGTGCTCGA CGCCACCGTCGCGCGTATCGAACAGCTGTTCCAGCAGCCGCACGACGGCGTAACCGGCGTCAATACCGGCTACGACGATC TGAATAAAAAGACCGCCGGTTTGCAGCCCTCGGATTTGATTATCGTCGCCGCGCGTCCGTCAATGGGGAAAACCACTTTT GCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCAGTCTGGAGATGCCCTCGGAACA GATTATGATGCGTTCTCTGGCCTCGCTGTCGCGCGTCGATCAGACCCGCATCCGTACCGGCCAGCTTGACGATGAGGACT GGGCGCGCATATCCGGCACGATGGGCATTCTGCTGGAAAAACGTAACATCTACATTGACGACTCTTCCGGCCTGACGCCG ACGGAGGTGCGTTCCCGCGCGCGCCGTATCGCCCGCGAGCACGGCGGCATCGGGCTTATCATGATCGACTACCTCCAGCT GATGCGCGTGCCGTCGCTTTCTGATAACCGTACGCTGGAAATCGCCGAAATCTCCCGCTCGCTGAAGGCGCTGGCGAAAG AGCTACAAGTGCCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCGCTGGAACAGCGCGCCGATAAGCGCCCGGTCAACTCA GACCTGCGTGAATCCGGCTCCATCGAGCAGGATGCCGACCTGATCATGTTTATCTACCGTGATGAGGTCTATCACGAGAA CAGCGACCTGAAAGGCATCGCGGAAATCATTATTGGTAAGCAGCGTAACGGCCCTATCGGTACGGTACGACTGACATTTA ACGGGCAATGGTCGCGTTTTGATAATTATGCCGGGCCACAATACGACGACGAATAA Protein sequence : MAGNKPFNKQQTDARERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMGRLQESGS PIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTP TEVRSRARRIAREHGGIGLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-105 | 55 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-106 | 54 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-107 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-106 | 54 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-91 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-91 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-87 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-82 | 45 |
