Gene Information

Name : alr (ROD_36381)
Accession : YP_003367083.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 3830806 - 3831885 bp
Length : 1080 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCGGCAACAGTTGTTATTAACCGCCGCGCTCTGCGACACAATCTGCAGCGTCTGCGTCAGCTGGCCCCTGCCAG
CAAACTGGTTGCAGTAGTGAAAGCGAACGCCTATGGACACGGTCTGTTAGAGACCGCGCGAACGCTCCCCGATGCCGACG
CTTTTGGCGTCGCGCGTCTCGAAGAGGCTCTGCGCCTGCGCGCGGGCGGCATTACGCAGCCAGTACTGCTGCTGGAAGGC
TTTTTTGAGGCGTCAGACTTACCGACCATCTCCGCGCAGCATCTGCACACAGCGGTACATAACGAGGAGCAACTGGCCGC
GCTGGAAAGCGCCAGCCTGGATGAGCCGGTGACGGTGTGGATGAAGCTTGATACCGGGATGCACCGTCTGGGCGTGCTGC
CGGAGCAGGCTGAGGCTTTTTACCAGCGCCTGACGAAATGCAAAAACGTACGCCAGCCGGTGAATATCATCAGTCATTTT
GCCCGTGCGGACGAGCCGGAAAGCGGGGCGACGGAAAAGCAGCTTAATATCTTCAACACTTTCTGTGAAGGCAAACCGGG
TCAGCGTTCCATTGCCGCCTCTGGCGGGATCCTGCTGTGGTCGCAGTCGCATTTCAACTGGGCGCGTCCGGGGATTATTC
TTTACGGCGTGTCGCCGCTGGAGAACCGTTCTACCGGCGCCGATTTCGGCTGCCAGCCGGTGATGTCATTAACTTCAAGT
CTGATTGCGGTGCGTGAGCATAAGGCGGGCGAACCGGTCGGCTATGGCGGTACGTGGCAAAGCGAACGCGACACGCGCCT
TGGCGTGGTGGCGATGGGCTACGGCGACGGCTATCCGCGCGCGGCGCCTTCCGGAACTCCGGTGCTGGTAAACGGTCGCG
AAGTACCGATCGTCGGTCGCGTGGCGATGGATATGATCTGCGTCGACCTGGGGCCAGAAGCGCAGGATAAAGCGGGCGAT
CCGGTGATTTTGTGGGGCGAAGGGTTACCCGTGGAACGGATTGCCGAAATAACAAAAGTAAGTGCTTACGAACTTATCAC
GCGCCTGACATCAAGGGTGGCGATGAAGTACATTGATTAA

Protein sequence :
MQAATVVINRRALRHNLQRLRQLAPASKLVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITQPVLLLEG
FFEASDLPTISAQHLHTAVHNEEQLAALESASLDEPVTVWMKLDTGMHRLGVLPEQAEAFYQRLTKCKNVRQPVNIISHF
ARADEPESGATEKQLNIFNTFCEGKPGQRSIAASGGILLWSQSHFNWARPGIILYGVSPLENRSTGADFGCQPVMSLTSS
LIAVREHKAGEPVGYGGTWQSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPEAQDKAGD
PVILWGEGLPVERIAEITKVSAYELITRLTSRVAMKYID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 3e-59 42