Gene Information

Name : ssb (ROD_36301)
Accession : YP_003367075.1
Strain : Citrobacter rodentium ICC168
Genome accession: NC_013716
Putative virulence/resistance : Virulence
Product : single-stranded binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3823002 - 3823532 bp
Length : 531 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAGCAGAGGCATAAACAAAGTTATTCTGGTTGGTAATCTGGGTCAGGACCCGGAAGTCCGCTATTTGCCGAGTGG
CGGCGCAGTTGCCAACTTTACGCTGGCTACGTCGGACTCCTGGCGCGACAAGCAGACCGGCGAAATGAAAGAACAGACCG
AATGGCACCGCATCGTGATGTTCGGCAAGCTGGCTGAAGTGGCAGGCGAATACCTGCGTAAAGGTTCCCAGGTTTACATC
GAAGGCCAGCTGCGCACCCGTAAATGGACCGATCAGAGCGGGCAGGAGCGCTACACCACCGAGATCAACGTGCCGCAGAT
TGGCGGCGTGATGCAGATGCTCGGCAGCCGTCAGGGCGGCGGCGCGCCAGCGGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GCCAGCCGCAGCAACCGCAGCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCTGCGCCAGCA
GCGCCGTCTAACGAACCGCCGATGGATTTCGACGACGACATCCCGTTCTGA

Protein sequence : 
MASRGINKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTGEMKEQTEWHRIVMFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGSRQGGGAPAGGQQQQGGWGQPQQPQQGGNQFSGGAQSRPQQSAPA
APSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-39 73
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 9e-43 61
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 9e-43 61
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 6e-43 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_003367075.1 single-stranded binding protein VFG0576 Protein 1e-51 82